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Henry Crosswell 68e393951d joined parents into one file 2 ay önce
.gitignore fbe862109e added git ignore for ds store 3 ay önce
README.md d2987e9fd6 add a brief readme outlining test data types 3 ay önce
pyrat-api-multiple-response-and-parents-both-parents.json 3b7eed8428 updating files to join parents 2 ay önce
pyrat-api-multiple-response-and-parents-offspring.json 6607045683 updated test data to include match asserts better 3 ay önce
pyrat-api-multiple-response-multiple-parents.csv 9dc46d3c61 changed column names to fit new naming scheme 2 ay önce
pyrat-api-multiple-responses-offspring.json 609d85dade fix typo in animalid 5 ay önce
pyrat-api-multiple-responses-parents.json 68e393951d joined parents into one file 2 ay önce
pyrat-api-multiple-responses.csv 6a833f2c20 removed err multiple parents 2 ay önce
pyrat-api-no-parents-mutations-offspring.json c8bc4ed8b6 add example with no listed mutations or parents 5 ay önce
pyrat-api-no-parents-mutations.csv 77e740541e update to include new column naming scheme - test batch 2 ay önce
pyrat-api-single-parent-offspring.json 88dad25fe1 add example where all individuals are missing one parent 5 ay önce
pyrat-api-single-parent.csv 77e740541e update to include new column naming scheme - test batch 2 ay önce
pyrat-api-single-parent.json 70d89f92c9 rename files to represent both parents 2 ay önce
pyrat-api-single-response-offspring.json 1acee0f65e add mock json responses for api requests 5 ay önce
pyrat-api-single-response-parents.json 3b7eed8428 updating files to join parents 2 ay önce
pyrat-api-single-response.csv 77e740541e update to include new column naming scheme - test batch 2 ay önce
pyrat-data-2-mutations.csv d7d9998345 reverting back to previous stanrdised testing 2 ay önce
pyrat-data-3-mutations.csv d7d9998345 reverting back to previous stanrdised testing 2 ay önce
pyrat-data-forbidden-genotypes.csv d7d9998345 reverting back to previous stanrdised testing 2 ay önce
pyrat-data-single-mutation.csv 3b7eed8428 updating files to join parents 2 ay önce
standardised-data-2-mutations.csv d7d9998345 reverting back to previous stanrdised testing 2 ay önce
standardised-data-3-mutations.csv d7d9998345 reverting back to previous stanrdised testing 2 ay önce
standardised-data-forbidden-genotypes.csv d7d9998345 reverting back to previous stanrdised testing 2 ay önce
standardised-data-single-mutation.csv d7d9998345 reverting back to previous stanrdised testing 2 ay önce

README.md

oscar-test-data

Test data for OSCaR breeding scheme calculator.

All test data is fake, but matches the structure and edge cases of real data from a PyRAT server.

Types of test data

  • *.json: JSON files of raw PyRAT api responses
  • pyrat-api-*.csv: Expected csv files output by get_pyrat_data
  • pyrat-data-*.csv: Input csv files to standardise_pyrat_csv
  • standardised-data-*.csv: Expected output csv files from standardise_pyrat_csv