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Henry Crosswell 6284fdd4f8 Merge branch 'km/frontend-calc' of neuroinformatics/oscar-test-data into master hace 1 mes
.gitignore 8c360ad2c0 resolve conflict by adding git ignore hace 2 meses
README.md d2987e9fd6 add a brief readme outlining test data types hace 3 meses
pyrat-api-line-mutations-response.json a51ac9e2d9 switch mutation order so we can check alphabetical sorting hace 2 meses
pyrat-api-lines-response-1.json 7e0b7d8963 add mock responses for api lines call hace 2 meses
pyrat-api-lines-response-2.json 7e0b7d8963 add mock responses for api lines call hace 2 meses
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pyrat-api-multiple-response-and-parents-both-parents.json 3b7eed8428 updating files to join parents hace 2 meses
pyrat-api-multiple-response-and-parents-offspring.json 6607045683 updated test data to include match asserts better hace 3 meses
pyrat-api-multiple-response-multiple-parents.csv 9dc46d3c61 changed column names to fit new naming scheme hace 2 meses
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pyrat-api-single-parent-mother.json 88dad25fe1 add example where all individuals are missing one parent hace 5 meses
pyrat-api-single-parent-offspring.json 88dad25fe1 add example where all individuals are missing one parent hace 5 meses
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pyrat-api-single-response-parents.json 3b7eed8428 updating files to join parents hace 2 meses
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pyrat-data-1-mutation.csv e6c2b42f29 changed file name to fit naming convention hace 2 meses
pyrat-data-2-mutations.csv e84a420e6a updated column names hace 2 meses
pyrat-data-3-mutations.csv e84a420e6a updated column names hace 2 meses
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pyrat-data-forbidden-parents.csv ad0891b69b fixed test data hace 1 mes
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pyrat-data-multiple-parents-3-mutations.csv cbe4272c77 fix errors in data hace 2 meses
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standardised-data-2-mutations.csv 12bffb64a0 merge upstream changes hace 1 mes
standardised-data-3-mutations.csv 12bffb64a0 merge upstream changes hace 1 mes
standardised-data-forbidden-genotypes.csv 12bffb64a0 merge upstream changes hace 1 mes
standardised-data-forbidden-parents.csv c3886dcd55 split mutation columns for remaining tables hace 1 mes
standardised-data-forbidden-schemes.csv 12bffb64a0 merge upstream changes hace 1 mes
standardised-data-multiple-parents-1-mutation.csv c3886dcd55 split mutation columns for remaining tables hace 1 mes
standardised-data-multiple-parents-2-mutations.csv c3886dcd55 split mutation columns for remaining tables hace 1 mes
standardised-data-multiple-parents-3-mutations.csv c3886dcd55 split mutation columns for remaining tables hace 1 mes

README.md

oscar-test-data

Test data for OSCaR breeding scheme calculator.

All test data is fake, but matches the structure and edge cases of real data from a PyRAT server.

Types of test data

  • *.json: JSON files of raw PyRAT api responses
  • pyrat-api-*.csv: Expected csv files output by get_pyrat_data
  • pyrat-data-*.csv: Input csv files to standardise_pyrat_csv
  • standardised-data-*.csv: Expected output csv files from standardise_pyrat_csv