Просмотр исходного кода

Revert "updated to fit test data and re-formatted"

This reverts commit a46c4b89c57b0f43842938089312d55057eb2c45.
Henry Crosswell 1 месяц назад
Родитель
Сommit
915b84eca0

+ 1 - 1
standardised-data-multiple-parents-2-mutations.csv

@@ -1,6 +1,6 @@
 ID_offspring,line_name,date_of_birth,ID_father_1,ID_father_2,ID_mother_1,ID_mother_2,sacrifice_reason,n_mutations,mutations,genotype_offspring,genotype_father,genotype_mother
 ID_offspring,line_name,date_of_birth,ID_father_1,ID_father_2,ID_mother_1,ID_mother_2,sacrifice_reason,n_mutations,mutations,genotype_offspring,genotype_father,genotype_mother
 ID-001,Line-AB,15/12/2025,ID-F1,ID-F2,ID-M1,ID-M2,End of experiment,2,Mut-A_Mut-B,het_het,wt_het,het_wt
 ID-001,Line-AB,15/12/2025,ID-F1,ID-F2,ID-M1,ID-M2,End of experiment,2,Mut-A_Mut-B,het_het,wt_het,het_wt
 ID-002,Line-AB,15/12/2025,ID-F1,ID-F2,ID-M1,ID-M2,End of experiment,2,Mut-A_Mut-B,hom_het,hom_wt,hom_het
 ID-002,Line-AB,15/12/2025,ID-F1,ID-F2,ID-M1,ID-M2,End of experiment,2,Mut-A_Mut-B,hom_het,hom_wt,hom_het
-ID-004,Line-AB,02/01/2026,ID-F3,ID-F4,ID-M3,,End of experiment,2,Mut-A_Mut-B,het_het,hom_wt,het_het
+ID-004,Line-AB,02/01/2026,ID-F3,ID-F4,ID-M3,,End of experiment,2,Mut-A_Mut-B,het_het,hom_wt,
 ID-007,Line-AB,15/02/2026,ID-F5,ID-F6,ID-M5,ID-M6,End of experiment,2,Mut-A_Mut-B,het_wt,het_wt,wt_wt
 ID-007,Line-AB,15/02/2026,ID-F5,ID-F6,ID-M5,ID-M6,End of experiment,2,Mut-A_Mut-B,het_wt,het_wt,wt_wt
 ID-010,Line-AB,15/03/2026,ID-F7,,ID-M5,ID-M8,End of experiment,2,Mut-A_Mut-B,het_wt,het_het,het_wt
 ID-010,Line-AB,15/03/2026,ID-F7,,ID-M5,ID-M8,End of experiment,2,Mut-A_Mut-B,het_wt,het_het,het_wt

+ 1 - 1
standardised-data-multiple-parents-3-mutations.csv

@@ -3,5 +3,5 @@ ID-001,Line-ABC,15/12/2025,ID-F1,ID-F2,ID-M1,ID-M2,End of experiment,3,Mut-A_Mut
 ID-002,Line-ABC,15/12/2025,ID-F1,ID-F2,ID-M1,ID-M2,End of experiment,3,Mut-A_Mut-B_Mut-C,hom_wt_wt,het_het_het,hom_wt_het
 ID-002,Line-ABC,15/12/2025,ID-F1,ID-F2,ID-M1,ID-M2,End of experiment,3,Mut-A_Mut-B_Mut-C,hom_wt_wt,het_het_het,hom_wt_het
 ID-003,Line-ABC,02/01/2026,ID-F3,,ID-M3,ID-M4,End of experiment,3,Mut-A_Mut-B_Mut-C,het_het_het,het_het_het,wt_het_het
 ID-003,Line-ABC,02/01/2026,ID-F3,,ID-M3,ID-M4,End of experiment,3,Mut-A_Mut-B_Mut-C,het_het_het,het_het_het,wt_het_het
 ID-004,Line-ABC,02/01/2026,ID-F3,,ID-M3,ID-M4,End of experiment,3,Mut-A_Mut-B_Mut-C,het_hom_het,het_hom_wt,wt_het_hom
 ID-004,Line-ABC,02/01/2026,ID-F3,,ID-M3,ID-M4,End of experiment,3,Mut-A_Mut-B_Mut-C,het_hom_het,het_hom_wt,wt_het_hom
-ID-007,Line-ABC,15/02/2026,ID-F5,ID-F6,ID-M5,ID-M6,End of experiment,3,Mut-A_Mut-B_Mut-C,het_wt_wt,het_wt_wt,wt_wt_wt
+ID-007,Line-ABC,15/02/2026,ID-F5,ID-F6,ID-M5,ID-M6,End of experiment,3,Mut-A_Mut-B_Mut-C,het_wt_wt,het_wt_wt,het_wt_wt
 ID-010,Line-ABC,15/03/2026,ID-F7,,ID-M5,ID-M8,End of experiment,3,Mut-A_Mut-B_Mut-C,het_wt_hom,het_wt_hom,wt_wt_hom
 ID-010,Line-ABC,15/03/2026,ID-F7,,ID-M5,ID-M8,End of experiment,3,Mut-A_Mut-B_Mut-C,het_wt_hom,het_wt_hom,wt_wt_hom