update 3 mutation data with edge cases for father, mother and date ID

pyrat-data-3-mutations.csv

@@ -1,23 +1,30 @@
 ID,Line / Strain (Name),DOB,Father,Mother,Sacrifice reason,Mutation 1,Grade 1,Mutation 2,Grade 2,Mutation 3,Grade 3,Father: Mutation 1,Father: Grade 1,Father: Mutation 2,Father: Grade 2,Father: Mutation 3,Father: Grade 3,Mother: Mutation 1,Mother: Grade 1,Mother: Mutation 2,Mother: Grade 2,Mother: Mutation 3,Mother: Grade 3
 ID-001,Line-ABC,15/12/2025,ID-F1,ID-M1,End of experiment,Mut-A,het,Mut-B,wt,Mut-C,hom,Mut-A,wt,Mut-B,wt,Mut-C,het,Mut-A,het,Mut-B,het,Mut-C,het
-ID-002,Line-ABC,13/12/2025,ID-F1,ID-M1,End of experiment,Mut-A,het,Mut-B,wt,Mut-C,hom,Mut-A,wt,Mut-B,wt,Mut-C,het,Mut-A,het,Mut-B,het,Mut-C,het
-ID-003,Line-ABC,11/12/2025,ID-F1,ID-M2,End of experiment,Mut-B,wt,Mut-A,het,Mut-C,hom,Mut-A,wt,Mut-B,wt,Mut-C,het,Mut-A,het,Mut-B,het,Mut-C,het
-ID-004,Line-ABC,12/12/2025,ID-F2,ID-M3,End of experiment,Mut-B,wt,Mut-A,het,Mut-C,hom,Mut-A,wt,Mut-B,wt,Mut-C,het,Mut-A,het,Mut-B,het,Mut-C,hom
-ID-005,Line-ABC,18/12/2025,ID-F3,ID-M4,End of experiment,Mut-C,hom,Mut-A,het,Mut-B,,Mut-A,wt,Mut-B,het,Mut-C,het,Mut-A,het,Mut-B,het,Mut-C,hom
-ID-006,Line-ABC,01/12/2025,ID-F3,ID-M4,End of experiment,Mut-C,het,Mut-B,wt,Mut-A,,Mut-A,het,,,,,Mut-B,het,Mut-C,hom,,
-ID-007,Line-ABC,01/12/2025,ID-F3,ID-M4,End of experiment,Mut-A,het,Mut-B,wt,Mut-C,,Mut-A,het,,,,,Mut-B,het,Mut-C,hom,,
-ID-008,Line-ABC,01/12/2025,ID-F4,ID-M5,End of experiment,Mut-A,wt,Mut-B,het,Mut-C,,Mut-A,het,,,,,Mut-B,het,Mut-C,hom,,
-ID-009,Line-ABC,01/12/2025,ID-F5,ID-M5,End of experiment,Mut-A,wt,Mut-B,het,Mut-C,,Mut-A,het,,,,,Mut-B,hom,Mut-C,het,,
-ID-010,Line-ABC,01/12/2025,ID-F6,ID-M6,End of experiment,Mut-A,wt,Mut-B,het,Mut-C,,Mut-A,het,,,,,Mut-B,hom,Mut-C,het,,
-ID-011,Line-ABC,01/12/2025,ID-F6,ID-M6,End of experiment,Mut-A,het,Mut-B,het,Mut-C,,Mut-B,hom,Mut-C,het,,,Mut-A,hom,,,,
-ID-012,Line-ABC,01/12/2025,ID-F7,ID-M7,End of experiment,Mut-A,het,Mut-B,het,Mut-C,,Mut-B,hom,Mut-C,het,,,Mut-A,hom,,,,
-ID-013,Line-ABC,01/12/2025,ID-F8,ID-M8,End of experiment,Mut-A,het,Mut-B,het,Mut-C,,Mut-B,hom,Mut-C,het,,,Mut-A,hom,,,,
-ID-014,Line-BCD,15/12/2025,ID-F9,ID-M9,End of experiment,Mut-B,het,Mut-C,het,Mut-D,hom,Mut-B,het,Mut-C,het,Mut-D,hom,Mut-B,hom,Mut-C,het,Mut-D,hom
-ID-015,Line-BCD,13/12/2025,ID-F9,ID-M9,End of experiment,Mut-B,het,Mut-C,het,Mut-D,hom,Mut-B,het,Mut-C,het,Mut-D,hom,Mut-B,hom,Mut-C,het,Mut-D,hom
-ID-016,Line-BCD,11/12/2025,ID-F9,ID-M10,End of experiment,Mut-C,het,Mut-B,wt,Mut-D,hom,Mut-B,het,Mut-C,het,Mut-D,hom,Mut-B,hom,Mut-C,het,Mut-D,hom
-ID-017,Line-BCD,12/12/2025,ID-F10,ID-M11,End of experiment,Mut-C,wt,Mut-B,het,Mut-D,hom,Mut-B,het,Mut-D,hom,,,Mut-C,het,,,,
-ID-018,Line-BCD,18/12/2025,ID-F11,ID-M12,End of experiment,Mut-B,wt,Mut-C,het,Mut-D,hom,Mut-B,het,Mut-D,het,,,Mut-C,het,,,,
-ID-019,Line-BCD,01/12/2025,ID-F11,ID-M12,End of experiment,Mut-B,wt,Mut-C,het,Mut-D,hom,Mut-C,het,,,,,Mut-B,het,Mut-D,hom,,
-ID-020,Line-BCD,01/12/2025,ID-F11,ID-M12,End of experiment,Mut-B,wt,Mut-C,het,Mut-D,hom,Mut-C,het,,,,,Mut-B,het,Mut-D,het,,
-ID-021,Line-CDE,01/12/2025,ID-F12,ID-M13,End of experiment,Mut-C,hom,Mut-D,hom,Mut-E,het,Mut-C,het,Mut-D,hom,Mut-E,hom,Mut-D,het,Mut-C,hom,Mut-E,hom
-ID-022,Line-CDE,01/12/2025,ID-F12,ID-M13,End of experiment,Mut-C,hom,Mut-D,hom,Mut-E,het,Mut-C,het,Mut-D,hom,Mut-E,hom,Mut-D,het,Mut-C,hom,Mut-E,hom
+ID-002,Line-ABC,15/12/2025,ID-F1,ID-M1,End of experiment,Mut-A,het,Mut-B,wt,Mut-C,hom,Mut-A,wt,Mut-B,wt,Mut-C,het,Mut-A,het,Mut-B,het,Mut-C,het
+ID-003,Line-ABC,02/01/2025,ID-F1,ID-M1,End of experiment,Mut-B,wt,Mut-A,het,Mut-C,hom,Mut-A,wt,Mut-B,wt,Mut-C,het,Mut-A,het,Mut-B,het,Mut-C,het
+ID-004,Line-ABC,02/01/2025,ID-F1,ID-M1,End of experiment,Mut-C,hom,Mut-A,het,Mut-B,wt,Mut-A,wt,Mut-B,wt,Mut-C,het,Mut-A,het,Mut-B,het,Mut-C,het
+ID-005,Line-ABC,02/01/2025,ID-F1,ID-M1,End of experiment,Mut-A,wt,Mut-B,het,Mut-C,hom,Mut-A,wt,Mut-B,wt,Mut-C,het,Mut-A,het,Mut-B,het,Mut-C,het
+ID-006,Line-ABC,02/01/2025,ID-F1,ID-M1,End of experiment,Mut-A,wt,Mut-B,het,Mut-C,hom,Mut-A,wt,Mut-B,wt,Mut-C,het,Mut-A,het,Mut-B,het,Mut-C,het
+ID-007,Line-ABC,02/01/2025,ID-F2,ID-M2,End of experiment,Mut-B,wt,Mut-A,hom,Mut-C,het,Mut-A,het,Mut-B,het,Mut-C,het,Mut-A,wt,Mut-B,wt,Mut-C,het
+ID-008,Line-ABC,02/01/2025,ID-F2,ID-M2,End of experiment,Mut-C,het,Mut-B,wt,Mut-A,hom,Mut-A,het,Mut-B,het,Mut-C,het,Mut-A,wt,Mut-B,wt,Mut-C,het
+ID-009,Line-ABC,18/12/2025,ID-F3,ID-M3,End of experiment,Mut-B,wt,Mut-A,het,Mut-C,hom,Mut-A,wt,Mut-B,het,Mut-C,het,Mut-A,het,Mut-B,het,Mut-C,hom
+ID-010,Line-ABC,18/12/2025,ID-F3,ID-M3,End of experiment,Mut-C,hom,Mut-A,het,Mut-B,,Mut-A,wt,Mut-B,het,Mut-C,het,Mut-A,het,Mut-B,het,Mut-C,hom
+ID-011,Line-ABC,10/11/2025,ID-F4,ID-M4,End of experiment,Mut-A,het,Mut-B,wt,Mut-C,hom,Mut-A,het,Mut-B,het,Mut-C,hom,Mut-A,,Mut-B,het,Mut-C,het
+ID-012,Line-ABC,10/11/2025,ID-F4,ID-M4,End of experiment,Mut-C,hom,Mut-A,het,Mut-B,,Mut-A,het,Mut-B,het,Mut-C,hom,Mut-A,,Mut-B,het,Mut-C,het
+ID-013,Line-ABC,01/12/2025,ID-F5,ID-M5,End of experiment,Mut-C,het,Mut-B,wt,Mut-A,,Mut-A,het,,,,,Mut-B,het,Mut-C,hom,,
+ID-014,Line-ABC,01/12/2025,ID-F5,ID-M5,End of experiment,Mut-A,het,Mut-B,wt,Mut-C,,Mut-A,het,,,,,Mut-B,het,Mut-C,hom,,
+ID-015,Line-ABC,08/09/2025,ID-F6,ID-M5,End of experiment,Mut-A,wt,Mut-B,het,Mut-C,,Mut-A,het,,,,,Mut-B,het,Mut-C,hom,,
+ID-016,Line-ABC,01/12/2025,ID-F7,ID-M6,End of experiment,Mut-A,wt,Mut-B,het,Mut-C,,Mut-A,het,,,,,Mut-B,hom,Mut-C,het,,
+ID-017,Line-ABC,06/06/2025,ID-F7,ID-M7,End of experiment,Mut-A,wt,Mut-B,het,Mut-C,,Mut-A,het,,,,,Mut-B,hom,Mut-C,het,,
+ID-018,Line-ABC,08/12/2025,ID-F8,ID-M8,End of experiment,Mut-A,het,Mut-B,het,Mut-C,,Mut-B,hom,Mut-C,het,,,Mut-A,hom,,,,
+ID-019,Line-ABC,08/12/2025,ID-F8,ID-M8,End of experiment,Mut-A,het,Mut-B,het,Mut-C,,Mut-B,hom,Mut-C,het,,,Mut-A,hom,,,,
+ID-020,Line-ABC,08/12/2025,ID-F8,ID-M8,End of experiment,Mut-A,,Mut-B,het,Mut-C,het,Mut-B,hom,Mut-C,het,,,Mut-A,hom,,,,
+ID-021,Line-BCD,15/12/2025,ID-F9,ID-M9,End of experiment,Mut-B,het,Mut-C,het,Mut-D,hom,Mut-B,het,Mut-C,het,Mut-D,hom,Mut-B,hom,Mut-C,het,Mut-D,hom
+ID-022,Line-BCD,15/12/2025,ID-F9,ID-M9,End of experiment,Mut-B,het,Mut-C,het,Mut-D,hom,Mut-B,het,Mut-C,het,Mut-D,hom,Mut-B,hom,Mut-C,het,Mut-D,hom
+ID-023,Line-BCD,15/12/2025,ID-F9,ID-M9,End of experiment,Mut-C,het,Mut-B,wt,Mut-D,hom,Mut-B,het,Mut-C,het,Mut-D,hom,Mut-B,hom,Mut-C,het,Mut-D,hom
+ID-024,Line-BCD,12/12/2025,ID-F10,ID-M10,End of experiment,Mut-C,wt,Mut-B,het,Mut-D,hom,Mut-B,het,Mut-D,hom,,,Mut-C,het,,,,
+ID-025,Line-BCD,01/12/2025,ID-F11,ID-M11,End of experiment,Mut-B,wt,Mut-C,het,Mut-D,hom,Mut-B,het,Mut-D,het,,,Mut-C,het,,,,
+ID-026,Line-BCD,18/12/2025,ID-F12,ID-M12,End of experiment,Mut-B,wt,Mut-C,het,Mut-D,hom,Mut-C,het,,,,,Mut-B,het,Mut-D,hom,,
+ID-027,Line-BCD,01/12/2025,ID-F13,ID-M13,End of experiment,Mut-B,wt,Mut-C,het,Mut-D,hom,Mut-C,het,,,,,Mut-B,het,Mut-D,het,,
+ID-028,Line-CDE,03/08/2025,ID-F14,ID-M14,End of experiment,Mut-C,hom,Mut-D,hom,Mut-E,het,Mut-C,het,Mut-D,hom,Mut-E,hom,Mut-D,het,Mut-C,hom,Mut-E,hom
+ID-029,Line-CDE,03/08/2025,ID-F14,ID-M14,End of experiment,Mut-C,hom,Mut-D,hom,Mut-E,het,Mut-C,het,Mut-D,hom,Mut-E,hom,Mut-D,het,Mut-C,hom,Mut-E,hom

standardised-data-3-mutations.csv

@@ -1,23 +1,30 @@
 ID_offspring,line_name,date_of_birth,ID_father,ID_mother,sacrifice_reason,n_mutations,mutations,genotype_offspring,genotype_father,genotype_mother
 ID-001,Line-ABC,15/12/2025,ID-F1,ID-M1,End of experiment,3,Mut-A_Mut-B_Mut-C,het_wt_hom,wt_wt_het,het_het_het
-ID-002,Line-ABC,13/12/2025,ID-F1,ID-M1,End of experiment,3,Mut-A_Mut-B_Mut-C,het_wt_hom,wt_wt_het,het_het_het
-ID-003,Line-ABC,11/12/2025,ID-F1,ID-M2,End of experiment,3,Mut-A_Mut-B_Mut-C,het_wt_hom,wt_wt_het,het_het_het
-ID-004,Line-ABC,12/12/2025,ID-F2,ID-M3,End of experiment,3,Mut-A_Mut-B_Mut-C,het_wt_hom,wt_wt_het,het_het_hom
-ID-005,Line-ABC,18/12/2025,ID-F3,ID-M4,End of experiment,3,Mut-A_Mut-B_Mut-C,het_wt_hom,wt_het_het,het_het_hom
-ID-006,Line-ABC,01/12/2025,ID-F3,ID-M4,End of experiment,3,Mut-A_Mut-B_Mut-C,wt_wt_het,het_wt_wt,wt_het_hom
-ID-007,Line-ABC,01/12/2025,ID-F3,ID-M4,End of experiment,3,Mut-A_Mut-B_Mut-C,het_wt_wt,het_wt_wt,wt_het_hom
-ID-008,Line-ABC,01/12/2025,ID-F4,ID-M5,End of experiment,3,Mut-A_Mut-B_Mut-C,wt_het_wt,het_wt_wt,wt_het_hom
-ID-009,Line-ABC,01/12/2025,ID-F5,ID-M5,End of experiment,3,Mut-A_Mut-B_Mut-C,wt_het_wt,het_wt_wt,wt_hom_het
-ID-010,Line-ABC,01/12/2025,ID-F6,ID-M6,End of experiment,3,Mut-A_Mut-B_Mut-C,wt_het_wt,het_wt_wt,wt_hom_het
-ID-011,Line-ABC,01/12/2025,ID-F6,ID-M6,End of experiment,3,Mut-A_Mut-B_Mut-C,het_het_wt,wt_hom_het,hom_wt_wt
-ID-012,Line-ABC,01/12/2025,ID-F7,ID-M7,End of experiment,3,Mut-A_Mut-B_Mut-C,het_het_wt,wt_hom_het,hom_wt_wt
-ID-013,Line-ABC,01/12/2025,ID-F8,ID-M8,End of experiment,3,Mut-A_Mut-B_Mut-C,het_het_wt,wt_hom_het,hom_wt_wt
-ID-014,Line-BCD,15/12/2025,ID-F9,ID-M9,End of experiment,3,Mut-B_Mut-C_Mut-D,het_het_hom,het_het_hom,hom_het_hom
-ID-015,Line-BCD,13/12/2025,ID-F9,ID-M9,End of experiment,3,Mut-B_Mut-C_Mut-D,het_het_hom,het_het_hom,hom_het_hom
-ID-016,Line-BCD,11/12/2025,ID-F9,ID-M10,End of experiment,3,Mut-B_Mut-C_Mut-D,wt_het_hom,het_het_hom,hom_het_hom
-ID-017,Line-BCD,12/12/2025,ID-F10,ID-M11,End of experiment,3,Mut-B_Mut-C_Mut-D,het_wt_hom,het_wt_hom,wt_het_wt
-ID-018,Line-BCD,18/12/2025,ID-F11,ID-M12,End of experiment,3,Mut-B_Mut-C_Mut-D,wt_het_hom,het_wt_het,wt_het_wt
-ID-019,Line-BCD,01/12/2025,ID-F11,ID-M12,End of experiment,3,Mut-B_Mut-C_Mut-D,wt_het_hom,wt_het_wt,het_wt_hom
-ID-020,Line-BCD,01/12/2025,ID-F11,ID-M12,End of experiment,3,Mut-B_Mut-C_Mut-D,wt_het_hom,wt_het_wt,het_wt_het
-ID-021,Line-CDE,01/12/2025,ID-F12,ID-M13,End of experiment,3,Mut-C_Mut-D_Mut-E,hom_hom_het,het_hom_hom,hom_het_hom
-ID-022,Line-CDE,01/12/2025,ID-F12,ID-M13,End of experiment,3,Mut-C_Mut-D_Mut-E,hom_hom_het,het_hom_hom,hom_het_hom
+ID-002,Line-ABC,15/12/2025,ID-F1,ID-M1,End of experiment,3,Mut-A_Mut-B_Mut-C,het_wt_hom,wt_wt_het,het_het_het
+ID-003,Line-ABC,02/01/2025,ID-F1,ID-M1,End of experiment,3,Mut-A_Mut-B_Mut-C,het_wt_hom,wt_wt_het,het_het_het
+ID-004,Line-ABC,02/01/2025,ID-F1,ID-M1,End of experiment,3,Mut-A_Mut-B_Mut-C,het_wt_hom,wt_wt_het,het_het_het
+ID-005,Line-ABC,02/01/2025,ID-F1,ID-M1,End of experiment,3,Mut-A_Mut-B_Mut-C,wt_het_hom,wt_wt_het,het_het_het
+ID-006,Line-ABC,02/01/2025,ID-F1,ID-M1,End of experiment,3,Mut-A_Mut-B_Mut-C,wt_het_hom,wt_wt_het,het_het_het
+ID-007,Line-ABC,02/01/2025,ID-F2,ID-M2,End of experiment,3,Mut-A_Mut-B_Mut-C,hom_wt_het,het_het_het,wt_wt_het
+ID-008,Line-ABC,02/01/2025,ID-F2,ID-M2,End of experiment,3,Mut-A_Mut-B_Mut-C,hom_wt_het,het_het_het,wt_wt_het
+ID-009,Line-ABC,18/12/2025,ID-F3,ID-M3,End of experiment,3,Mut-A_Mut-B_Mut-C,het_wt_hom,wt_het_het,het_het_hom
+ID-010,Line-ABC,18/12/2025,ID-F3,ID-M3,End of experiment,3,Mut-A_Mut-B_Mut-C,het_wt_hom,wt_het_het,het_het_hom
+ID-011,Line-ABC,10/11/2025,ID-F4,ID-M4,End of experiment,3,Mut-A_Mut-B_Mut-C,het_wt_hom,het_het_hom,wt_het_het
+ID-012,Line-ABC,10/11/2025,ID-F4,ID-M4,End of experiment,3,Mut-A_Mut-B_Mut-C,het_wt_hom,het_het_hom,wt_het_het
+ID-013,Line-ABC,01/12/2025,ID-F5,ID-M5,End of experiment,3,Mut-A_Mut-B_Mut-C,wt_wt_het,het_wt_wt,wt_het_hom
+ID-014,Line-ABC,01/12/2025,ID-F5,ID-M5,End of experiment,3,Mut-A_Mut-B_Mut-C,het_wt_wt,het_wt_wt,wt_het_hom
+ID-015,Line-ABC,08/09/2025,ID-F6,ID-M5,End of experiment,3,Mut-A_Mut-B_Mut-C,wt_het_wt,het_wt_wt,wt_het_hom
+ID-016,Line-ABC,01/12/2025,ID-F7,ID-M6,End of experiment,3,Mut-A_Mut-B_Mut-C,wt_het_wt,het_wt_wt,wt_hom_het
+ID-017,Line-ABC,06/06/2025,ID-F7,ID-M7,End of experiment,3,Mut-A_Mut-B_Mut-C,wt_het_wt,het_wt_wt,wt_hom_het
+ID-018,Line-ABC,08/12/2025,ID-F8,ID-M8,End of experiment,3,Mut-A_Mut-B_Mut-C,het_het_wt,wt_hom_het,hom_wt_wt
+ID-019,Line-ABC,08/12/2025,ID-F8,ID-M8,End of experiment,3,Mut-A_Mut-B_Mut-C,het_het_wt,wt_hom_het,hom_wt_wt
+ID-020,Line-ABC,08/12/2025,ID-F8,ID-M8,End of experiment,3,Mut-A_Mut-B_Mut-C,wt_het_het,wt_hom_het,hom_wt_wt
+ID-021,Line-BCD,15/12/2025,ID-F9,ID-M9,End of experiment,3,Mut-B_Mut-C_Mut-D,het_het_hom,het_het_hom,hom_het_hom
+ID-022,Line-BCD,15/12/2025,ID-F9,ID-M9,End of experiment,3,Mut-B_Mut-C_Mut-D,het_het_hom,het_het_hom,hom_het_hom
+ID-023,Line-BCD,15/12/2025,ID-F9,ID-M9,End of experiment,3,Mut-B_Mut-C_Mut-D,wt_het_hom,het_het_hom,hom_het_hom
+ID-024,Line-BCD,12/12/2025,ID-F10,ID-M10,End of experiment,3,Mut-B_Mut-C_Mut-D,het_wt_hom,het_wt_hom,wt_het_wt
+ID-025,Line-BCD,01/12/2025,ID-F11,ID-M11,End of experiment,3,Mut-B_Mut-C_Mut-D,wt_het_hom,wt_het_wt,het_wt_hom
+ID-026,Line-BCD,18/12/2025,ID-F12,ID-M12,End of experiment,3,Mut-B_Mut-C_Mut-D,wt_het_hom,het_wt_het,wt_het_wt
+ID-027,Line-BCD,01/12/2025,ID-F13,ID-M13,End of experiment,3,Mut-B_Mut-C_Mut-D,wt_het_hom,wt_het_wt,het_wt_het
+ID-028,Line-CDE,03/08/2025,ID-F14,ID-M14,End of experiment,3,Mut-C_Mut-D_Mut-E,hom_hom_het,het_hom_hom,hom_het_hom
+ID-029,Line-CDE,03/08/2025,ID-F14,ID-M14,End of experiment,3,Mut-C_Mut-D_Mut-E,hom_hom_het,het_hom_hom,hom_het_hom