metadata.yaml 16 KB

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  1. "DLC_rotating-mouse_eye-tracking_stim-black.predictions.h5":
  2. sha256sum: "6d76f75ee076fadf004f4dd48c47e3f47acafb351da556670aa2c1be543ab049"
  3. source_software: "DeepLabCut"
  4. type: "poses"
  5. fps: 40
  6. species: "mouse"
  7. number_of_individuals: 1
  8. shared_by:
  9. name: "Sepiedeh Keshavarzi"
  10. affiliation: "Sainsbury Wellcome Centre, UCL"
  11. frame:
  12. file_name: "rotating-mouse_eye-tracking_stim-black_frame-5sec.png"
  13. sha256sum: "a2b12148197dced5aa0970281e9e61a5daa92878d1484f5685326392640992e1"
  14. video:
  15. file_name: "rotating-mouse_eye-tracking_stim-black_video.mp4"
  16. sha256sum: "a7972d5dde19a1f994fc72a23ee693102a5e3ee59bc386273ca089354fde07b5"
  17. note: "The left eye of the mouse is tracked while the animal is fixed on a rotating platform, in the dark. The view is flipped up-down, so the eyebrow appears below the eye. The reflection of the infrared LED array used to illuminate the camera recording is visible in the pupil. This dataset comes from the same experimental setup as 'DLC_rotating-mouse_eye-tracking_stim-uniform.predictions.h5', but the visual stimulus is different (dark here vs uniformly lit in the 'uniform' dataset)."
  18. "DLC_rotating-mouse_eye-tracking_stim-uniform.predictions.h5":
  19. sha256sum: "bd8bd6bbd95bc998d863dc78fb42a40e47e9e0b37f700384f16546bd3b738b95"
  20. source_software: "DeepLabCut"
  21. type: "poses"
  22. fps: 40
  23. species: "mouse"
  24. number_of_individuals: 1
  25. shared_by:
  26. name: "Sepiedeh Keshavarzi"
  27. affiliation: "Sainsbury Wellcome Centre, UCL"
  28. frame:
  29. file_name: "rotating-mouse_eye-tracking_stim-uniform_frame-5sec.png"
  30. sha256sum: "1b4bac11cee78cdc6fff52e7084b5f2a14f7e8fcbb5452c84b3d28a00f709348"
  31. video:
  32. file_name: "rotating-mouse_eye-tracking_stim-uniform_video.mp4"
  33. sha256sum: "9a0c099d40c31c138c406236a5900544961956b2c0e0ff3536f34b0465a5874f"
  34. note: "The left eye of the mouse is tracked while the animal is fixed on a rotating platform, surrounded by a uniformly lit visual stimulus. The view is flipped up-down, so the eyebrow appears below the eye. The reflection of the infrared LED array used to illuminate the camera recording is visible in the pupil. This dataset comes from the same experimental setup as 'DLC_rotating-mouse_eye-tracking_stim-black.predictions.h5', but the visual stimulus is different (uniformly lit here vs dark in the 'black' dataset)."
  35. "DLC_single-mouse_EPM.predictions.csv":
  36. sha256sum: "859fe530407c1a2e229668c0fcd2693d24eadafb9e64ece845092ce53b96c3fd"
  37. source_software: "DeepLabCut"
  38. type: "poses"
  39. fps: 30
  40. species: "mouse"
  41. number_of_individuals: 1
  42. shared_by:
  43. name: "Loukia Katsouri"
  44. affiliation: "Sainsbury Wellcome Centre, UCL"
  45. frame:
  46. file_name: "single-mouse_EPM_frame-20sec.png"
  47. sha256sum: "fad9caac919e7041d4312c988a94c18f262f30a9dfe28e37e58e330f325d855f"
  48. video:
  49. file_name: "single-mouse_EPM_video.mp4"
  50. sha256sum: "17a0ef60d9015a63f73900b8bfb5297b3e0051ac1949c8c5107c41feb592e109"
  51. note: "Exported from the .h5 file with the same prefix."
  52. "DLC_single-mouse_EPM.predictions.h5":
  53. sha256sum: "e9c5a61790d6881d5639b2fd7c1c4afcb8521840d3d9a1bb613595529e06a7fc"
  54. source_software: "DeepLabCut"
  55. type: "poses"
  56. fps: 30
  57. species: "mouse"
  58. number_of_individuals: 1
  59. shared_by:
  60. name: "Loukia Katsouri"
  61. affiliation: "Sainsbury Wellcome Centre, UCL"
  62. frame:
  63. file_name: "single-mouse_EPM_frame-20sec.png"
  64. sha256sum: "fad9caac919e7041d4312c988a94c18f262f30a9dfe28e37e58e330f325d855f"
  65. video:
  66. file_name: "single-mouse_EPM_video.mp4"
  67. sha256sum: "17a0ef60d9015a63f73900b8bfb5297b3e0051ac1949c8c5107c41feb592e109"
  68. note: "Same data as in the .csv file with the same prefix."
  69. "DLC_single-mouse_pupil-tracking.predictions.h5":
  70. sha256sum: "8ac61027ab24a95c22e320814c81f11bdcd3256e6e8519292acb155a14b8752d"
  71. source_software: "DeepLabCut"
  72. type: "poses"
  73. fps: 90
  74. species: "mouse"
  75. number_of_individuals: 1
  76. shared_by:
  77. name: "Adedamola (Dammy) Onih, Athena Akrami"
  78. affiliation: "Sainsbury Wellcome Centre, UCL"
  79. frame:
  80. file_name: "single-mouse_pupil-tracking_frame-10sec.png"
  81. sha256sum: "b1f13a7e8c72ecb3c5fde2143c54b4788da49acf0fdc1b29c721c3be252846b3"
  82. video:
  83. file_name: "single-mouse_pupil-tracking_video.mp4"
  84. sha256sum: "f1504cc38b88c50f38b8eedda061c70b89bab1695dce322bfbfb854a09191bcf"
  85. note: "The left eye of a head-fixed mouse is tracked with 8 keypoints around the pupil and 2 keypoints at the eye corners."
  86. "DLC_single-wasp.predictions.csv":
  87. sha256sum: "9b194cc930c2e2e0d33c816320d029f889b306d53ff2fe95ff408e99c9cdea23"
  88. source_software: "DeepLabCut"
  89. type: "poses"
  90. fps: 40
  91. species: "jewel wasp"
  92. number_of_individuals: 1
  93. shared_by:
  94. name: "Sanna Titus"
  95. affiliation: "Sainsbury Wellcome Centre, UCL"
  96. frame:
  97. file_name: "single-wasp_frame-10sec.png"
  98. sha256sum: "d0d4ab3dceff93d3d192da6fe2427baffec8c2f23f2b1c8e997c4d004e816180"
  99. video:
  100. file_name: null
  101. sha256sum: null
  102. note: null
  103. "DLC_single-wasp.predictions.h5":
  104. sha256sum: "931dddb6ef5e08db6054d3757a441ee31dd0d9ff5a10802ad8405d6c4e7e274e"
  105. source_software: "DeepLabCut"
  106. type: "poses"
  107. fps: 40
  108. species: "jewel wasp"
  109. number_of_individuals: 1
  110. shared_by:
  111. name: "Sanna Titus"
  112. affiliation: "Sainsbury Wellcome Centre, UCL"
  113. frame:
  114. file_name: "single-wasp_frame-10sec.png"
  115. sha256sum: "d0d4ab3dceff93d3d192da6fe2427baffec8c2f23f2b1c8e997c4d004e816180"
  116. video:
  117. file_name: null
  118. sha256sum: null
  119. note: null
  120. "DLC_two-mice.predictions.csv":
  121. sha256sum: "6e891ab4e14a3ad74451ed0899f770b47aa3eb959d9824d3782827297d7c75e0"
  122. source_software: "DeepLabCut"
  123. type: "poses"
  124. fps: 100
  125. species: "mouse"
  126. number_of_individuals: 2
  127. shared_by:
  128. name: "Dimokratis Karamanlis"
  129. affiliation: "University of Geneva"
  130. frame:
  131. file_name: "two-mice_frame-600sec.png"
  132. sha256sum: "28df9b0128150baf631e03254925eb6562f247b15192aab7abe84fb5b603a164"
  133. video:
  134. file_name: null
  135. sha256sum: null
  136. note: "The two mice are separated by a barrier, so their trajectories should not cross if the identity tracking is correct."
  137. "LP_mouse-face_AIND.predictions.csv":
  138. sha256sum: "13620f20a3fbb20c9ef0ad6fd8898944d2cfe3e83c5fe18946b7592e0a718da2"
  139. source_software: "LightningPose"
  140. type: "poses"
  141. fps: 60
  142. species: "mouse"
  143. number_of_individuals: 1
  144. shared_by:
  145. name: "Shailaja Akella"
  146. affiliation: "Allen Institute for Neural Dynamics"
  147. frame:
  148. file_name: null
  149. sha256sum: null
  150. video:
  151. file_name: null
  152. sha256sum: null
  153. note: "The predictions come from a video of a mouse's face, while performing the Allen 'visual behavior neuropixels' task"
  154. "LP_mouse-twoview_AIND.predictions.csv":
  155. sha256sum: "22cded593ff77226dffab3c10f87874e597d86d70d62a81e5c4c690a96fd1e49"
  156. source_software: "LightningPose"
  157. type: "poses"
  158. fps: 30
  159. species: "mouse"
  160. number_of_individuals: 1
  161. shared_by:
  162. name: "Shailaja Akella"
  163. affiliation: "Allen Institute for Neural Dynamics"
  164. frame:
  165. file_name: null
  166. sha256sum: null
  167. video:
  168. file_name: null
  169. sha256sum: null
  170. note: "The predictions come from a concatenated video consisting of a frontal and a side view of a mouse, while performing the Allen 'visual behavior neuropixels' task"
  171. "SLEAP_single-mouse_EPM.analysis.h5":
  172. sha256sum: "33f8e21961ded2081495a75997391835ce4596049d8ab497ebd761124d9b0ac2"
  173. source_software: "SLEAP"
  174. type: "poses"
  175. fps: 30
  176. species: "mouse"
  177. number_of_individuals: 1
  178. shared_by:
  179. name: "Niko Sirmpilatze"
  180. affiliation: "Sainsbury Wellcome Centre, UCL"
  181. frame:
  182. file_name: "single-mouse_EPM_frame-20sec.png"
  183. sha256sum: "fad9caac919e7041d4312c988a94c18f262f30a9dfe28e37e58e330f325d855f"
  184. video:
  185. file_name: "single-mouse_EPM_video.mp4"
  186. sha256sum: "17a0ef60d9015a63f73900b8bfb5297b3e0051ac1949c8c5107c41feb592e109"
  187. note: "This was exported from the .slp file with the same prefix. The underlying video is the same as for DLC_single-mouse_EPM, and was provided by Loukia Katsouri."
  188. "SLEAP_single-mouse_EPM.predictions.slp":
  189. sha256sum: "42c2e6e14aa57d61a9ed7e1eae56562c1e95d275d227c304f6d89f919775f656"
  190. source_software: "SLEAP"
  191. type: "poses"
  192. fps: 30
  193. species: "mouse"
  194. number_of_individuals: 1
  195. shared_by:
  196. name: "Niko Sirmpilatze"
  197. affiliation: "Sainsbury Wellcome Centre, UCL"
  198. frame:
  199. file_name: "single-mouse_EPM_frame-20sec.png"
  200. sha256sum: "fad9caac919e7041d4312c988a94c18f262f30a9dfe28e37e58e330f325d855f"
  201. video:
  202. file_name: "single-mouse_EPM_video.mp4"
  203. sha256sum: "17a0ef60d9015a63f73900b8bfb5297b3e0051ac1949c8c5107c41feb592e109"
  204. note: "This corresponds to the .h5 file with the same prefix. The underlying video is the same as for DLC_single-mouse_EPM, and was provided by Loukia Katsouri."
  205. "SLEAP_three-mice_Aeon_mixed-labels.analysis.h5":
  206. sha256sum: "899651ec027eb8fd6181246f89142ad1c0a40f14394fc8144d44ea093c0e137d"
  207. source_software: "SLEAP"
  208. type: "poses"
  209. fps: 50
  210. species: "mouse"
  211. number_of_individuals: 3
  212. shared_by:
  213. name: "Chang Huan Lo"
  214. affiliation: "Sainsbury Wellcome Centre, UCL"
  215. frame:
  216. file_name: "three-mice_Aeon_frame-5sec.png"
  217. sha256sum: "889e1bbee6cb23eb6d52820748123579acbd0b2a7265cf72a903dabb7fcc3d1a"
  218. video:
  219. file_name: "three-mice_Aeon_video.avi"
  220. sha256sum: "bc7406442c90467f11a982fd6efd85258ec5ec7748228b245caf0358934f0e7d"
  221. note: "Contains a mix of predicted and user-defined labels. It was exported from the .slp file with the same prefix."
  222. "SLEAP_three-mice_Aeon_mixed-labels.predictions.slp":
  223. sha256sum: "6d3f2c5446e9c12aabf28d5a9470835736b0419dcefebba89c305114f83b82d1"
  224. source_software: "SLEAP"
  225. type: "poses"
  226. fps: 50
  227. species: "mouse"
  228. number_of_individuals: 3
  229. shared_by:
  230. name: "Chang Huan Lo"
  231. affiliation: "Sainsbury Wellcome Centre, UCL"
  232. frame:
  233. file_name: "three-mice_Aeon_frame-5sec.png"
  234. sha256sum: "889e1bbee6cb23eb6d52820748123579acbd0b2a7265cf72a903dabb7fcc3d1a"
  235. video:
  236. file_name: "three-mice_Aeon_video.avi"
  237. sha256sum: "bc7406442c90467f11a982fd6efd85258ec5ec7748228b245caf0358934f0e7d"
  238. note: "Contains a mix of predicted and user-defined labels. It corresponds to the .h5 file with the same prefix."
  239. "SLEAP_three-mice_Aeon_proofread.analysis.h5":
  240. sha256sum: "82ebd281c406a61536092863bc51d1a5c7c10316275119f7daf01c1ff33eac2a"
  241. source_software: "SLEAP"
  242. type: "poses"
  243. fps: 50
  244. species: "mouse"
  245. number_of_individuals: 3
  246. shared_by:
  247. name: "Chang Huan Lo"
  248. affiliation: "Sainsbury Wellcome Centre, UCL"
  249. frame:
  250. file_name: "three-mice_Aeon_frame-5sec.png"
  251. sha256sum: "889e1bbee6cb23eb6d52820748123579acbd0b2a7265cf72a903dabb7fcc3d1a"
  252. video:
  253. file_name: "three-mice_Aeon_video.avi"
  254. sha256sum: "bc7406442c90467f11a982fd6efd85258ec5ec7748228b245caf0358934f0e7d"
  255. note: "All labels were proofread (user-defined) and can be considered ground truth. It was exported from the .slp file with the same prefix."
  256. "SLEAP_three-mice_Aeon_proofread.predictions.slp":
  257. sha256sum: "7b7436a52dfd5f4d80d7c66919ad1a1732e5435fe33faf9011ec5f7b7074e788"
  258. source_software: "SLEAP"
  259. type: "poses"
  260. fps: 50
  261. species: "mouse"
  262. number_of_individuals: 3
  263. shared_by:
  264. name: "Chang Huan Lo"
  265. affiliation: "Sainsbury Wellcome Centre, UCL"
  266. frame:
  267. file_name: "three-mice_Aeon_frame-5sec.png"
  268. sha256sum: "889e1bbee6cb23eb6d52820748123579acbd0b2a7265cf72a903dabb7fcc3d1a"
  269. video:
  270. file_name: "three-mice_Aeon_video.avi"
  271. sha256sum: "bc7406442c90467f11a982fd6efd85258ec5ec7748228b245caf0358934f0e7d"
  272. note: "All labels were proofread (user-defined) and can be considered ground truth. It corresponds to the .h5 file with the same prefix."
  273. "SLEAP_two-mice_octagon.analysis.h5":
  274. sha256sum: "358ec029988421cb77cd0ec1d5bab86dd4b4f8719e6410832146cfdb84a28931"
  275. source_software: "SLEAP"
  276. type: "poses"
  277. fps: 50
  278. species: "mouse"
  279. number_of_individuals: 2
  280. shared_by:
  281. name: "Mehul Rastogi, Chunyu Ann Duan"
  282. affiliation: "Sainsbury Wellcome Centre, UCL"
  283. frame:
  284. file_name: "two-mice_octagon_frame-10sec.png"
  285. sha256sum: "56185ecf2e8f176ac39af29d51bfa1ccf85a11bd7cacfb4d9f5615b61c20f438"
  286. video:
  287. file_name: "two-mice_octagon_video.mp4"
  288. sha256sum: "43dfdbd3cec4768e564c79a71dd218d4f1219e36dec18d78e5e24f15df7da9d2"
  289. note: "Two mice competing for rewards in an octagonal arena, see https://doi.org/10.1101/2025.02.14.638359."
  290. "SLEAP_two-mice_social-interaction.analysis.h5":
  291. sha256sum: "f7f1e59d4b2c34712089f8aaf2390272291d93e6991c1abe32d9ce798a6234f9"
  292. source_software: "SLEAP"
  293. type: "poses"
  294. fps: 90
  295. species: "mouse"
  296. number_of_individuals: 2
  297. shared_by:
  298. name: "Laura Schwarz"
  299. affiliation: "Sainsbury Wellcome Centre, UCL"
  300. frame:
  301. file_name: null
  302. sha256sum: null
  303. video:
  304. file_name: null
  305. sha256sum: null
  306. note: "The tracks have not been fully corrected, they still contain identity switches. This file does NOT correspond to the .slp file with the same prefix."
  307. "SLEAP_two-mice_social-interaction.predictions.slp":
  308. sha256sum: "45881affde9704c045e70b8d4b3f6bbb8d9bd8ef9f4cdea6d173cfe35857549b"
  309. source_software: "SLEAP"
  310. type: "poses"
  311. fps: 90
  312. species: "mouse"
  313. number_of_individuals: 2
  314. shared_by:
  315. name: "Laura Schwarz"
  316. affiliation: "Sainsbury Wellcome Centre, UCL"
  317. frame:
  318. file_name: null
  319. sha256sum: null
  320. video:
  321. file_name: null
  322. sha256sum: null
  323. note: "The tracks have not been fully corrected, there may be more tracks than mice. This file does NOT correspond to the .h5 file with the same prefix."
  324. "VIA_multiple-crabs_5-frames_labels.csv":
  325. sha256sum: "98de641c2577b210263ea85b02a0c7bf17d144ed9268730242a7d5869f86434b"
  326. source_software: "VIA-tracks"
  327. type: "bboxes"
  328. fps: null
  329. species: "crab"
  330. number_of_individuals: null
  331. shared_by:
  332. name: "Sanna Titus"
  333. affiliation: "Sainsbury Wellcome Centre, UCL"
  334. frame:
  335. file_name: null
  336. sha256sum: null
  337. video:
  338. file_name: null
  339. sha256sum: null
  340. note: "This file contains manually corrected predictions for tracked bounding boxes for 90 individuals over 5 frames. "
  341. "VIA_multiple-crabs_5-frames_labels_missing.csv":
  342. sha256sum: "98de641c2577b210263ea85b02a0c7bf17d144ed9268730242a7d5869f86434b"
  343. source_software: "VIA-tracks"
  344. type: "bboxes"
  345. fps: null
  346. species: "crab"
  347. number_of_individuals: null
  348. shared_by:
  349. name: "Sanna Titus"
  350. affiliation: "Sainsbury Wellcome Centre, UCL"
  351. frame:
  352. file_name: null
  353. sha256sum: null
  354. video:
  355. file_name: null
  356. sha256sum: null
  357. note: "This file is modified from VIA_multiple-crabs_5-frames_labels.csv, such that individual id_71 is only present in frames 1 and 3. The rest of individuals are present in all frames. "
  358. "VIA_single-crab_MOCA-crab-1.csv":
  359. sha256sum: "df68f3d957c1de999d48428c41fc2ed21c8b884160c5eced942c8215c572a99e"
  360. source_software: "VIA-tracks"
  361. type: "bboxes"
  362. fps: 24
  363. species: "crab"
  364. number_of_individuals: 1
  365. shared_by:
  366. name: "MoCA - Moving Camouflaged Animals Dataset"
  367. affiliation: "Visual Geometry Group, University of Oxford"
  368. frame:
  369. file_name: "single-crab_MOCA-crab-1_frame-0.jpg"
  370. sha256sum: "02d3977371ffc31ff51364e0487e097e9d072075e811e9b869967a92ecf67501"
  371. video:
  372. file_name: "single-crab_MOCA-crab-1_video.mp4"
  373. sha256sum: "98b70c1e19b072158f50685ca55c3a7b01a94c0400091223fe750db8e3cf2a16"
  374. note: "The video is 168 frames long, but the file contains annotations for 35 frames only (1 every 5 frames in the video, plus the first and the last frame). "
  375. "VIA_single-crab_MOCA-crab-1_linear-interp.csv":
  376. sha256sum: "ffdaeb5f6e83281e8e41a317ed2019bd8b6e37c6f5b790d4d13d2f5ecc94c991"
  377. source_software: "VIA-tracks"
  378. type: "bboxes"
  379. fps: 24
  380. species: "crab"
  381. number_of_individuals: 1
  382. shared_by:
  383. name: "GitHub contributor Mahima Sahu (@Mahi7828), modified from 'MoCA - Moving Camouflaged Animals Dataset'"
  384. affiliation: "IIT Bombay"
  385. frame:
  386. file_name: "single-crab_MOCA-crab-1_frame-0.jpg"
  387. sha256sum: "02d3977371ffc31ff51364e0487e097e9d072075e811e9b869967a92ecf67501"
  388. video:
  389. file_name: "single-crab_MOCA-crab-1_video.mp4"
  390. sha256sum: "98b70c1e19b072158f50685ca55c3a7b01a94c0400091223fe750db8e3cf2a16"
  391. note: "This file is the linearly interpolated version of the VIA_single-crab_MOCA-crab-1.csv file. "
  392. "anipose_mouse-paw_anipose-paper.triangulation.csv":
  393. sha256sum: "5ccd549bc122154b0e4a6bd01b4a8ee6f21c28dc3e1651a19dd0dd09f89d64e6"
  394. source_software: "Anipose"
  395. type: "poses"
  396. fps: 200
  397. species: "mouse"
  398. number_of_individuals: 1
  399. shared_by:
  400. name: "Tuthill lab"
  401. affiliation: "University of Washington"
  402. frame:
  403. file_name: null
  404. sha256sum: null
  405. video:
  406. file_name: null
  407. sha256sum: null
  408. note: "This file was provided by the Tuthill lab, and is used in the Anipose paper."