metadata.yaml 26 KB

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  1. DLC_rotating-mouse_eye-tracking_stim-black.predictions.h5:
  2. sha256sum: 6d76f75ee076fadf004f4dd48c47e3f47acafb351da556670aa2c1be543ab049
  3. source_software: DeepLabCut
  4. type: poses
  5. fps: 40
  6. species: mouse
  7. number_of_individuals: 1
  8. shared_by:
  9. name: Sepiedeh Keshavarzi
  10. affiliation: Sainsbury Wellcome Centre, UCL
  11. frame:
  12. file_name: rotating-mouse_eye-tracking_stim-black_frame-5sec.png
  13. sha256sum: a2b12148197dced5aa0970281e9e61a5daa92878d1484f5685326392640992e1
  14. video:
  15. file_name: rotating-mouse_eye-tracking_stim-black_video.mp4
  16. sha256sum: a7972d5dde19a1f994fc72a23ee693102a5e3ee59bc386273ca089354fde07b5
  17. note: The left eye of the mouse is tracked while the animal is fixed on a rotating
  18. platform, in the dark. The view is flipped up-down, so the eyebrow appears below
  19. the eye. The reflection of the infrared LED array used to illuminate the camera
  20. recording is visible in the pupil. This dataset comes from the same experimental
  21. setup as 'DLC_rotating-mouse_eye-tracking_stim-uniform.predictions.h5', but the
  22. visual stimulus is different (dark here vs uniformly lit in the 'uniform' dataset).
  23. DLC_rotating-mouse_eye-tracking_stim-uniform.predictions.h5:
  24. sha256sum: bd8bd6bbd95bc998d863dc78fb42a40e47e9e0b37f700384f16546bd3b738b95
  25. source_software: DeepLabCut
  26. type: poses
  27. fps: 40
  28. species: mouse
  29. number_of_individuals: 1
  30. shared_by:
  31. name: Sepiedeh Keshavarzi
  32. affiliation: Sainsbury Wellcome Centre, UCL
  33. frame:
  34. file_name: rotating-mouse_eye-tracking_stim-uniform_frame-5sec.png
  35. sha256sum: 1b4bac11cee78cdc6fff52e7084b5f2a14f7e8fcbb5452c84b3d28a00f709348
  36. video:
  37. file_name: rotating-mouse_eye-tracking_stim-uniform_video.mp4
  38. sha256sum: 9a0c099d40c31c138c406236a5900544961956b2c0e0ff3536f34b0465a5874f
  39. note: The left eye of the mouse is tracked while the animal is fixed on a rotating
  40. platform, surrounded by a uniformly lit visual stimulus. The view is flipped up-down,
  41. so the eyebrow appears below the eye. The reflection of the infrared LED array
  42. used to illuminate the camera recording is visible in the pupil. This dataset
  43. comes from the same experimental setup as 'DLC_rotating-mouse_eye-tracking_stim-black.predictions.h5',
  44. but the visual stimulus is different (uniformly lit here vs dark in the 'black'
  45. dataset).
  46. DLC_single-mouse_EPM.predictions.csv:
  47. sha256sum: 859fe530407c1a2e229668c0fcd2693d24eadafb9e64ece845092ce53b96c3fd
  48. source_software: DeepLabCut
  49. type: poses
  50. fps: 30
  51. species: mouse
  52. number_of_individuals: 1
  53. shared_by:
  54. name: Loukia Katsouri
  55. affiliation: Sainsbury Wellcome Centre, UCL
  56. frame:
  57. file_name: single-mouse_EPM_frame-20sec.png
  58. sha256sum: fad9caac919e7041d4312c988a94c18f262f30a9dfe28e37e58e330f325d855f
  59. video:
  60. file_name: single-mouse_EPM_video.mp4
  61. sha256sum: 17a0ef60d9015a63f73900b8bfb5297b3e0051ac1949c8c5107c41feb592e109
  62. note: Exported from the .h5 file with the same prefix.
  63. DLC_single-mouse_EPM.predictions.h5:
  64. sha256sum: e9c5a61790d6881d5639b2fd7c1c4afcb8521840d3d9a1bb613595529e06a7fc
  65. source_software: DeepLabCut
  66. type: poses
  67. fps: 30
  68. species: mouse
  69. number_of_individuals: 1
  70. shared_by:
  71. name: Loukia Katsouri
  72. affiliation: Sainsbury Wellcome Centre, UCL
  73. frame:
  74. file_name: single-mouse_EPM_frame-20sec.png
  75. sha256sum: fad9caac919e7041d4312c988a94c18f262f30a9dfe28e37e58e330f325d855f
  76. video:
  77. file_name: single-mouse_EPM_video.mp4
  78. sha256sum: 17a0ef60d9015a63f73900b8bfb5297b3e0051ac1949c8c5107c41feb592e109
  79. note: Same data as in the .csv file with the same prefix.
  80. DLC_single-mouse_pupil-tracking.predictions.h5:
  81. sha256sum: 8ac61027ab24a95c22e320814c81f11bdcd3256e6e8519292acb155a14b8752d
  82. source_software: DeepLabCut
  83. type: poses
  84. fps: 90
  85. species: mouse
  86. number_of_individuals: 1
  87. shared_by:
  88. name: Adedamola (Dammy) Onih, Athena Akrami
  89. affiliation: Sainsbury Wellcome Centre, UCL
  90. frame:
  91. file_name: single-mouse_pupil-tracking_frame-10sec.png
  92. sha256sum: b1f13a7e8c72ecb3c5fde2143c54b4788da49acf0fdc1b29c721c3be252846b3
  93. video:
  94. file_name: single-mouse_pupil-tracking_video.mp4
  95. sha256sum: f1504cc38b88c50f38b8eedda061c70b89bab1695dce322bfbfb854a09191bcf
  96. note: The left eye of a head-fixed mouse is tracked with 8 keypoints around the
  97. pupil and 2 keypoints at the eye corners.
  98. DLC_single-wasp.predictions.csv:
  99. sha256sum: 9b194cc930c2e2e0d33c816320d029f889b306d53ff2fe95ff408e99c9cdea23
  100. source_software: DeepLabCut
  101. type: poses
  102. fps: 40
  103. species: jewel wasp
  104. number_of_individuals: 1
  105. shared_by:
  106. name: Sanna Titus
  107. affiliation: Sainsbury Wellcome Centre, UCL
  108. frame:
  109. file_name: single-wasp_frame-10sec.png
  110. sha256sum: d0d4ab3dceff93d3d192da6fe2427baffec8c2f23f2b1c8e997c4d004e816180
  111. video:
  112. file_name: null
  113. sha256sum: null
  114. note: null
  115. DLC_single-wasp.predictions.h5:
  116. sha256sum: 931dddb6ef5e08db6054d3757a441ee31dd0d9ff5a10802ad8405d6c4e7e274e
  117. source_software: DeepLabCut
  118. type: poses
  119. fps: 40
  120. species: jewel wasp
  121. number_of_individuals: 1
  122. shared_by:
  123. name: Sanna Titus
  124. affiliation: Sainsbury Wellcome Centre, UCL
  125. frame:
  126. file_name: single-wasp_frame-10sec.png
  127. sha256sum: d0d4ab3dceff93d3d192da6fe2427baffec8c2f23f2b1c8e997c4d004e816180
  128. video:
  129. file_name: null
  130. sha256sum: null
  131. note: null
  132. DLC_two-mice.predictions.csv:
  133. sha256sum: 6e891ab4e14a3ad74451ed0899f770b47aa3eb959d9824d3782827297d7c75e0
  134. source_software: DeepLabCut
  135. type: poses
  136. fps: 100
  137. species: mouse
  138. number_of_individuals: 2
  139. shared_by:
  140. name: Dimokratis Karamanlis
  141. affiliation: University of Geneva
  142. frame:
  143. file_name: two-mice_frame-600sec.png
  144. sha256sum: 28df9b0128150baf631e03254925eb6562f247b15192aab7abe84fb5b603a164
  145. video:
  146. file_name: null
  147. sha256sum: null
  148. note: The two mice are separated by a barrier, so their trajectories should not
  149. cross if the identity tracking is correct.
  150. DLC_smart-kage3_datetime-20240417T090006.predictions.h5:
  151. sha256sum: db5184c27bbdfd27591e6f4552ec9f523950f166f21c936cd9616db15be48888
  152. source_software: DeepLabCut
  153. type: poses
  154. fps: 2
  155. species: mouse
  156. number_of_individuals: 1
  157. shared_by:
  158. name: Loukia Katsouri
  159. affiliation: Sainsbury Wellcome Centre, UCL
  160. frame:
  161. file_name: smart-kage3_datetime-20240417T090006_frame-0.png
  162. sha256sum: f6ade1e14de2db10f27ad6989d953dc56370980570b64d3e5adecaa0772897ec
  163. video:
  164. file_name: smart-kage3_datetime-20240417T090006_video.mp4
  165. sha256sum: 1eb305f928768be6c88a327c8e3b651f7e114eec27cd7b143d529f0378df7446
  166. note: This is the 1st out of three one-hour-long segments. The start datetime is
  167. given in the file name.
  168. DLC_smart-kage3_datetime-20240417T100006.predictions.h5:
  169. sha256sum: c0d0b291f2d31e4d30b285f3c6f267750000c30e73db03ec789c3f6149e5b0bf
  170. source_software: DeepLabCut
  171. type: poses
  172. fps: 2
  173. species: mouse
  174. number_of_individuals: 1
  175. shared_by:
  176. name: Loukia Katsouri
  177. affiliation: Sainsbury Wellcome Centre, UCL
  178. frame:
  179. file_name: smart-kage3_datetime-20240417T100006_frame-0.png
  180. sha256sum: 75929eaac7224907950c3e242a00ea4a98264a2316986cbf9f1b5a495f3a3052
  181. video:
  182. file_name: smart-kage3_datetime-20240417T100006_video.mp4
  183. sha256sum: 9c6af3ac70f55104673bd072297a642125af3f8f3970cacd346c95404f5f69be
  184. note: This is the 2nd out of three one-hour-long segments. The start datetime is
  185. given in the file name.
  186. DLC_smart-kage3_datetime-20240417T110006.predictions.h5:
  187. sha256sum: 8d5a1c95fc84db4697f4d587da597aec596d646f88f33fa66c1d0d7fb997fd1f
  188. source_software: DeepLabCut
  189. type: poses
  190. fps: 2
  191. species: mouse
  192. number_of_individuals: 1
  193. shared_by:
  194. name: Loukia Katsouri
  195. affiliation: Sainsbury Wellcome Centre, UCL
  196. frame:
  197. file_name: smart-kage3_datetime-20240417T110006_frame-0.png
  198. sha256sum: becf458a98a7f463a90bbffdcc558b74652f5dca942c89c90c91c9c39f5eb9d3
  199. video:
  200. file_name: smart-kage3_datetime-20240417T110006_video.mp4
  201. sha256sum: 8bc03c7598c1d776d604943be091ebcebb44d8a70a8a41b8d4e60a6fe4c29809
  202. note: This is the 3rd out of three one-hour-long segments. The start datetime is
  203. given in the file name.
  204. LP_mouse-face_AIND.predictions.csv:
  205. sha256sum: 13620f20a3fbb20c9ef0ad6fd8898944d2cfe3e83c5fe18946b7592e0a718da2
  206. source_software: LightningPose
  207. type: poses
  208. fps: 60
  209. species: mouse
  210. number_of_individuals: 1
  211. shared_by:
  212. name: Shailaja Akella
  213. affiliation: Allen Institute for Neural Dynamics
  214. frame:
  215. file_name: null
  216. sha256sum: null
  217. video:
  218. file_name: null
  219. sha256sum: null
  220. note: The predictions come from a video of a mouse's face, while performing the
  221. Allen 'visual behavior neuropixels' task
  222. LP_mouse-twoview_AIND.predictions.csv:
  223. sha256sum: 22cded593ff77226dffab3c10f87874e597d86d70d62a81e5c4c690a96fd1e49
  224. source_software: LightningPose
  225. type: poses
  226. fps: 30
  227. species: mouse
  228. number_of_individuals: 1
  229. shared_by:
  230. name: Shailaja Akella
  231. affiliation: Allen Institute for Neural Dynamics
  232. frame:
  233. file_name: null
  234. sha256sum: null
  235. video:
  236. file_name: null
  237. sha256sum: null
  238. note: The predictions come from a concatenated video consisting of a frontal and
  239. a side view of a mouse, while performing the Allen 'visual behavior neuropixels'
  240. task
  241. SLEAP_single-mouse_EPM.analysis.h5:
  242. sha256sum: 33f8e21961ded2081495a75997391835ce4596049d8ab497ebd761124d9b0ac2
  243. source_software: SLEAP
  244. type: poses
  245. fps: 30
  246. species: mouse
  247. number_of_individuals: 1
  248. shared_by:
  249. name: Niko Sirmpilatze
  250. affiliation: Sainsbury Wellcome Centre, UCL
  251. frame:
  252. file_name: single-mouse_EPM_frame-20sec.png
  253. sha256sum: fad9caac919e7041d4312c988a94c18f262f30a9dfe28e37e58e330f325d855f
  254. video:
  255. file_name: single-mouse_EPM_video.mp4
  256. sha256sum: 17a0ef60d9015a63f73900b8bfb5297b3e0051ac1949c8c5107c41feb592e109
  257. note: This was exported from the .slp file with the same prefix. The underlying
  258. video is the same as for DLC_single-mouse_EPM, and was provided by Loukia Katsouri.
  259. SLEAP_single-mouse_EPM.predictions.slp:
  260. sha256sum: 42c2e6e14aa57d61a9ed7e1eae56562c1e95d275d227c304f6d89f919775f656
  261. source_software: SLEAP
  262. type: poses
  263. fps: 30
  264. species: mouse
  265. number_of_individuals: 1
  266. shared_by:
  267. name: Niko Sirmpilatze
  268. affiliation: Sainsbury Wellcome Centre, UCL
  269. frame:
  270. file_name: single-mouse_EPM_frame-20sec.png
  271. sha256sum: fad9caac919e7041d4312c988a94c18f262f30a9dfe28e37e58e330f325d855f
  272. video:
  273. file_name: single-mouse_EPM_video.mp4
  274. sha256sum: 17a0ef60d9015a63f73900b8bfb5297b3e0051ac1949c8c5107c41feb592e109
  275. note: This corresponds to the .h5 file with the same prefix. The underlying video
  276. is the same as for DLC_single-mouse_EPM, and was provided by Loukia Katsouri.
  277. SLEAP_three-mice_Aeon_mixed-labels.analysis.h5:
  278. sha256sum: 899651ec027eb8fd6181246f89142ad1c0a40f14394fc8144d44ea093c0e137d
  279. source_software: SLEAP
  280. type: poses
  281. fps: 50
  282. species: mouse
  283. number_of_individuals: 3
  284. shared_by:
  285. name: Chang Huan Lo
  286. affiliation: Sainsbury Wellcome Centre, UCL
  287. frame:
  288. file_name: three-mice_Aeon_frame-5sec.png
  289. sha256sum: 889e1bbee6cb23eb6d52820748123579acbd0b2a7265cf72a903dabb7fcc3d1a
  290. video:
  291. file_name: three-mice_Aeon_video.avi
  292. sha256sum: bc7406442c90467f11a982fd6efd85258ec5ec7748228b245caf0358934f0e7d
  293. note: Contains a mix of predicted and user-defined labels. It was exported from
  294. the .slp file with the same prefix.
  295. SLEAP_three-mice_Aeon_mixed-labels.predictions.slp:
  296. sha256sum: 6d3f2c5446e9c12aabf28d5a9470835736b0419dcefebba89c305114f83b82d1
  297. source_software: SLEAP
  298. type: poses
  299. fps: 50
  300. species: mouse
  301. number_of_individuals: 3
  302. shared_by:
  303. name: Chang Huan Lo
  304. affiliation: Sainsbury Wellcome Centre, UCL
  305. frame:
  306. file_name: three-mice_Aeon_frame-5sec.png
  307. sha256sum: 889e1bbee6cb23eb6d52820748123579acbd0b2a7265cf72a903dabb7fcc3d1a
  308. video:
  309. file_name: three-mice_Aeon_video.avi
  310. sha256sum: bc7406442c90467f11a982fd6efd85258ec5ec7748228b245caf0358934f0e7d
  311. note: Contains a mix of predicted and user-defined labels. It corresponds to the
  312. .h5 file with the same prefix.
  313. SLEAP_three-mice_Aeon_proofread.analysis.h5:
  314. sha256sum: 82ebd281c406a61536092863bc51d1a5c7c10316275119f7daf01c1ff33eac2a
  315. source_software: SLEAP
  316. type: poses
  317. fps: 50
  318. species: mouse
  319. number_of_individuals: 3
  320. shared_by:
  321. name: Chang Huan Lo
  322. affiliation: Sainsbury Wellcome Centre, UCL
  323. frame:
  324. file_name: three-mice_Aeon_frame-5sec.png
  325. sha256sum: 889e1bbee6cb23eb6d52820748123579acbd0b2a7265cf72a903dabb7fcc3d1a
  326. video:
  327. file_name: three-mice_Aeon_video.avi
  328. sha256sum: bc7406442c90467f11a982fd6efd85258ec5ec7748228b245caf0358934f0e7d
  329. note: All labels were proofread (user-defined) and can be considered ground truth.
  330. It was exported from the .slp file with the same prefix.
  331. SLEAP_three-mice_Aeon_proofread.predictions.slp:
  332. sha256sum: 7b7436a52dfd5f4d80d7c66919ad1a1732e5435fe33faf9011ec5f7b7074e788
  333. source_software: SLEAP
  334. type: poses
  335. fps: 50
  336. species: mouse
  337. number_of_individuals: 3
  338. shared_by:
  339. name: Chang Huan Lo
  340. affiliation: Sainsbury Wellcome Centre, UCL
  341. frame:
  342. file_name: three-mice_Aeon_frame-5sec.png
  343. sha256sum: 889e1bbee6cb23eb6d52820748123579acbd0b2a7265cf72a903dabb7fcc3d1a
  344. video:
  345. file_name: three-mice_Aeon_video.avi
  346. sha256sum: bc7406442c90467f11a982fd6efd85258ec5ec7748228b245caf0358934f0e7d
  347. note: All labels were proofread (user-defined) and can be considered ground truth.
  348. It corresponds to the .h5 file with the same prefix.
  349. SLEAP_two-mice_octagon.analysis.h5:
  350. sha256sum: 358ec029988421cb77cd0ec1d5bab86dd4b4f8719e6410832146cfdb84a28931
  351. source_software: SLEAP
  352. type: poses
  353. fps: 50
  354. species: mouse
  355. number_of_individuals: 2
  356. shared_by:
  357. name: Mehul Rastogi, Chunyu Ann Duan
  358. affiliation: Sainsbury Wellcome Centre, UCL
  359. frame:
  360. file_name: two-mice_octagon_frame-10sec.png
  361. sha256sum: 56185ecf2e8f176ac39af29d51bfa1ccf85a11bd7cacfb4d9f5615b61c20f438
  362. video:
  363. file_name: two-mice_octagon_video.mp4
  364. sha256sum: 43dfdbd3cec4768e564c79a71dd218d4f1219e36dec18d78e5e24f15df7da9d2
  365. note: Two mice competing for rewards in an octagonal arena, see https://doi.org/10.1101/2025.02.14.638359.
  366. MOVE_two-mice_octagon.analysis.nc:
  367. sha256sum: cb925055c5f7311a1c4cec41ca93932e5cb8620e28b1337c70b382cc8dbccca8
  368. source_software: movement
  369. type: poses
  370. fps: 50
  371. species: mouse
  372. number_of_individuals: 2
  373. shared_by:
  374. name: Niko Sirmpilatze
  375. affiliation: Sainsbury Wellcome Centre, UCL
  376. frame:
  377. file_name: two-mice_octagon_frame-10sec.png
  378. sha256sum: 56185ecf2e8f176ac39af29d51bfa1ccf85a11bd7cacfb4d9f5615b61c20f438
  379. video:
  380. file_name: two-mice_octagon_video.mp4
  381. sha256sum: 43dfdbd3cec4768e564c79a71dd218d4f1219e36dec18d78e5e24f15df7da9d2
  382. note: This file was generated from SLEAP_two-mice_octagon.analysis.h5, by converting
  383. it to the netCDF format using the movement package.
  384. SLEAP_two-mice_social-interaction.analysis.h5:
  385. sha256sum: f7f1e59d4b2c34712089f8aaf2390272291d93e6991c1abe32d9ce798a6234f9
  386. source_software: SLEAP
  387. type: poses
  388. fps: 90
  389. species: mouse
  390. number_of_individuals: 2
  391. shared_by:
  392. name: Laura Schwarz
  393. affiliation: Sainsbury Wellcome Centre, UCL
  394. frame:
  395. file_name: null
  396. sha256sum: null
  397. video:
  398. file_name: null
  399. sha256sum: null
  400. note: The tracks have not been fully corrected, they still contain identity switches.
  401. This file does NOT correspond to the .slp file with the same prefix.
  402. SLEAP_two-mice_social-interaction.predictions.slp:
  403. sha256sum: 45881affde9704c045e70b8d4b3f6bbb8d9bd8ef9f4cdea6d173cfe35857549b
  404. source_software: SLEAP
  405. type: poses
  406. fps: 90
  407. species: mouse
  408. number_of_individuals: 2
  409. shared_by:
  410. name: Laura Schwarz
  411. affiliation: Sainsbury Wellcome Centre, UCL
  412. frame:
  413. file_name: null
  414. sha256sum: null
  415. video:
  416. file_name: null
  417. sha256sum: null
  418. note: The tracks have not been fully corrected, there may be more tracks than mice.
  419. This file does NOT correspond to the .h5 file with the same prefix.
  420. VIA_multiple-crabs_5-frames_labels.csv:
  421. sha256sum: 98de641c2577b210263ea85b02a0c7bf17d144ed9268730242a7d5869f86434b
  422. source_software: VIA-tracks
  423. type: bboxes
  424. fps: null
  425. species: crab
  426. number_of_individuals: null
  427. shared_by:
  428. name: Sanna Titus
  429. affiliation: Sainsbury Wellcome Centre, UCL
  430. frame:
  431. file_name: null
  432. sha256sum: null
  433. video:
  434. file_name: null
  435. sha256sum: null
  436. note: 'This file contains manually corrected predictions for tracked bounding boxes
  437. for 90 individuals over 5 frames. '
  438. VIA_multiple-crabs_5-frames_labels_missing.csv:
  439. sha256sum: a5193509ddb9f132ab223e98a0f7d84fc3fa57c2a80052e0d1a4fa29813911fb
  440. source_software: VIA-tracks
  441. type: bboxes
  442. fps: null
  443. species: crab
  444. number_of_individuals: null
  445. shared_by:
  446. name: Sanna Titus
  447. affiliation: Sainsbury Wellcome Centre, UCL
  448. frame:
  449. file_name: null
  450. sha256sum: null
  451. video:
  452. file_name: null
  453. sha256sum: null
  454. note: 'This file is modified from VIA_multiple-crabs_5-frames_labels.csv, such that
  455. individual id_71 is only present in frames 1 and 3. The rest of individuals are
  456. present in all frames. '
  457. VIA_single-crab_MOCA-crab-1.csv:
  458. sha256sum: a473a36585d1802d276dd3b605c9adab74df6e5658c962395ff9299cac2c58f5
  459. source_software: VIA-tracks
  460. type: bboxes
  461. fps: 24
  462. species: crab
  463. number_of_individuals: 1
  464. shared_by:
  465. name: MoCA - Moving Camouflaged Animals Dataset
  466. affiliation: Visual Geometry Group, University of Oxford
  467. frame:
  468. file_name: single-crab_MOCA-crab-1_frame-0.jpg
  469. sha256sum: 02d3977371ffc31ff51364e0487e097e9d072075e811e9b869967a92ecf67501
  470. video:
  471. file_name: single-crab_MOCA-crab-1_video.mp4
  472. sha256sum: 98b70c1e19b072158f50685ca55c3a7b01a94c0400091223fe750db8e3cf2a16
  473. note: 'The video is 168 frames long, but the file contains annotations for 35 frames
  474. only (1 every 5 frames in the video, plus the first and the last frame). '
  475. VIA_single-crab_MOCA-crab-1_linear-interp.csv:
  476. sha256sum: 793c280faaa1c3e1fb32148e16c0ce3102a03006fa5b141b9762d01a7c0aa262
  477. source_software: VIA-tracks
  478. type: bboxes
  479. fps: 24
  480. species: crab
  481. number_of_individuals: 1
  482. shared_by:
  483. name: GitHub contributor Mahima Sahu (@Mahi7828), modified from 'MoCA - Moving
  484. Camouflaged Animals Dataset'
  485. affiliation: IIT Bombay
  486. frame:
  487. file_name: single-crab_MOCA-crab-1_frame-0.jpg
  488. sha256sum: 02d3977371ffc31ff51364e0487e097e9d072075e811e9b869967a92ecf67501
  489. video:
  490. file_name: single-crab_MOCA-crab-1_video.mp4
  491. sha256sum: 98b70c1e19b072158f50685ca55c3a7b01a94c0400091223fe750db8e3cf2a16
  492. note: 'This file is the linearly interpolated version of the VIA_single-crab_MOCA-crab-1.csv
  493. file. '
  494. MOVE_single-crab_MOCA-crab-1_linear-interp.nc:
  495. sha256sum: 3c3e147eedd6d6b983b5153ec9af253c822e7b64d4e533d6e55087a531176395
  496. source_software: movement
  497. type: bboxes
  498. fps: 24
  499. species: crab
  500. number_of_individuals: 1
  501. shared_by:
  502. name: Niko Sirmpilatze, modified from 'MoCA - Moving Camouflaged Animals Dataset'
  503. affiliation: Sainsbury Wellcome Centre, UCL
  504. frame:
  505. file_name: single-crab_MOCA-crab-1_frame-0.jpg
  506. sha256sum: 02d3977371ffc31ff51364e0487e097e9d072075e811e9b869967a92ecf67501
  507. video:
  508. file_name: single-crab_MOCA-crab-1_video.mp4
  509. sha256sum: 98b70c1e19b072158f50685ca55c3a7b01a94c0400091223fe750db8e3cf2a16
  510. note: This file was generated from VIA_single-crab_MOCA-crab-1_linear-interp.csv,
  511. by converting it to the netCDF format using the movement package.
  512. anipose_mouse-paw_anipose-paper.triangulation.csv:
  513. sha256sum: 5ccd549bc122154b0e4a6bd01b4a8ee6f21c28dc3e1651a19dd0dd09f89d64e6
  514. source_software: Anipose
  515. type: poses
  516. fps: 200
  517. species: mouse
  518. number_of_individuals: 1
  519. shared_by:
  520. name: Tuthill lab
  521. affiliation: University of Washington
  522. frame:
  523. file_name: null
  524. sha256sum: null
  525. video:
  526. file_name: null
  527. sha256sum: null
  528. note: This file was provided by the Tuthill lab, and is used in the Anipose paper.
  529. TRex_five-locusts.zip:
  530. sha256sum: a0619765b826466c0a8e015f40dfcf2bae35ba4a046ae641be829b8174707ad5
  531. source_software: TRex
  532. type: poses
  533. fps: 5
  534. species: locust
  535. number_of_individuals: 5
  536. shared_by:
  537. name: Angela Albi
  538. affiliation: Department of Collective Behaviour, Max Planck Institute of Animal
  539. Behavior
  540. frame:
  541. file_name: locusts-noqr_n-5_date-20250117_frame-bg.png
  542. sha256sum: 53ae76c5980d2988e329f0d74a88c11376e637bafd77342c6c9ccf0ecbb5da6f
  543. video:
  544. file_name: null
  545. sha256sum: null
  546. note: 5 locusts (Schistocerca gregaria) in a 60cm diameter custom-built arena. Corresponds
  547. to locusts-noqr_202501117_5 in the data source. The original video was recorded
  548. at 5 fps, but the playback in the associated video file (https://edmond.mpg.de/file.xhtml?fileId=265442&version=1.0)
  549. is set to 30 frames per second.
  550. FreeMoCap_hello-world_session-folder.zip:
  551. sha256sum: 920460f939c180ec80d66faedf23a89eca77338f41b7b1639632c0877d2245fd
  552. source_software: FreeMoCap
  553. type: poses
  554. fps: 30
  555. species: human
  556. number_of_individuals: 1
  557. shared_by:
  558. name: Max Staras
  559. affiliation: Sainsbury Wellcome Centre, UCL
  560. frame:
  561. file_name: null
  562. sha256sum: null
  563. video:
  564. file_name: null
  565. sha256sum: null
  566. note: A FreeMoCap session folder with two recordings. In the first one, a human
  567. writes the word "hello" in the air with their index finger ("recording_15_37_37_gmt+1").
  568. In the second recording, they write the word "world" ("recording_15_45_49_gmt+1").
  569. Only the "output_data" directory for each recording is included.
  570. FreeMoCap_star-jump_session-folder.zip:
  571. sha256sum: b108063a6624ca941446e7776e2fde8daa089d80e52a5e9b698b87089cfeef73
  572. source_software: FreeMoCap
  573. type: poses
  574. fps: 30
  575. species: human
  576. number_of_individuals: 1
  577. shared_by:
  578. name: Max Staras
  579. affiliation: Sainsbury Wellcome Centre, UCL
  580. frame:
  581. file_name: null
  582. sha256sum: null
  583. video:
  584. file_name: null
  585. sha256sum: null
  586. note: A FreeMoCap session folder with a recording of a human doing four star jumps
  587. ("recording_15_30_36_gmt+1"). Only the "output_data" directory for the selected
  588. recording is included.
  589. SLEAP_OSFM_zebras_drone.h5:
  590. sha256sum: a7ca88c70eb761e14b3b70b4f0290c6cc9e81c32255c2d7dae2bb28a8ba91334
  591. source_software: SLEAP
  592. type: poses
  593. fps: 29.97
  594. species: zebra
  595. number_of_individuals: 44
  596. shared_by:
  597. name: Isla Duporge
  598. affiliation: Department of Ecology & Evolutionary Biology, Princeton University
  599. frame:
  600. file_name: null
  601. sha256sum: null
  602. video:
  603. file_name: null
  604. sha256sum: null
  605. note: 44 trajectories of zebras (Equus quagga) in escape behaviour, in world coordinate
  606. system, recorded for 3.5 min. Each individual has two keypoints (head and tail).
  607. The original trajectory data was obtained from a moving camera drone, and then
  608. expressed in a coordinate system fixed to the ground using structure-from-motion
  609. (with OpenSFM and OpenDroneMap). See https://github.com/neuroinformatics-unit/zebras-stitching
  610. for further details.
  611. EKS_IBL-paw_multicam_left.predictions.csv:
  612. sha256sum: 10499eda7321d4da9212f318a7bae654b24a0ee5fbe0557d714cdb55959addeb
  613. source_software: EKS
  614. type: poses
  615. fps: 60
  616. species: mouse
  617. number_of_individuals: 1
  618. shared_by:
  619. name: Matt Whiteway
  620. affiliation: International Brain Lab (IBL)
  621. frame:
  622. file_name: null
  623. sha256sum: null
  624. video:
  625. file_name: null
  626. sha256sum: null
  627. note: These predictions were generated using the Ensemble Kalman Smoother (EKS)
  628. on the multi-camera IBL-paw dataset that is distributed as part of the EKS repository
  629. https://github.com/paninski-lab/eks. This dataset is from the International Brain
  630. Lab (IBL) and consists of head-fixed mice performing a decision-making task. Two
  631. cameras, 'left' (60 Hz) and 'right' (150 Hz), capture roughly orthogonal side
  632. views of the mouse's face and upper trunk during each session. This particular
  633. file corresponds to the left camera output of EKS.
  634. EKS_IBL-paw_multicam_right.predictions.csv:
  635. sha256sum: 074f9bcdf4806e49dfb9e1721a64becada157401046b61c9d8f26c2393893d17
  636. source_software: EKS
  637. type: poses
  638. fps: 60
  639. species: mouse
  640. number_of_individuals: 1
  641. shared_by:
  642. name: Matt Whiteway
  643. affiliation: International Brain Lab (IBL)
  644. frame:
  645. file_name: null
  646. sha256sum: null
  647. video:
  648. file_name: null
  649. sha256sum: null
  650. note: These predictions were generated using the Ensemble Kalman Smoother (EKS)
  651. on the multi-camera IBL-paw dataset that is distributed as part of the EKS repository
  652. https://github.com/paninski-lab/eks. This dataset is from the International Brain
  653. Lab (IBL) and consists of head-fixed mice performing a decision-making task. Two
  654. cameras, 'left' (60 Hz) and 'right' (150 Hz), capture roughly orthogonal side
  655. views of the mouse's face and upper trunk during each session. This particular
  656. file corresponds to the right camera output of EKS. Note that EKS downsampled
  657. the right camera's original 150 Hz frame rate to match the left camera's 60 Hz.
  658. DLC_single-mouse_DBTravelator_2D.predictions.h5:
  659. sha256sum: c84093a730a7958d96b0b9b968390e086d83eaa084a736aab6c6ef7ff1b52e2b
  660. source_software: DeepLabCut
  661. type: poses
  662. fps: 247
  663. species: mouse
  664. number_of_individuals: 1
  665. shared_by:
  666. name: Holly Morley
  667. affiliation: Sainsbury Wellcome Centre, UCL
  668. frame:
  669. file_name: single-mouse_DBTravelator_frame-275.png
  670. sha256sum: 821722b8174f0ab875c958d9f9ad2faea8041369ce01404e8f7dc0a7c1131e2a
  671. video:
  672. file_name: single-mouse_DBTravelator_video.avi
  673. sha256sum: 864ba65a90d58804a733ac01fa7a3ae4065f28e7728278ae235b441529d690e5
  674. note: This file contains 2D pose predictions from the 'side' camera view of a mouse
  675. locomoting on a dual-belt travelator apparatus. A total of 50 keypoints were tracked
  676. across the mouse body and experimental apparatus, capturing the side profile during
  677. locomotion.
  678. DLC_single-mouse_DBTravelator_3D.predictions.h5:
  679. sha256sum: 574ca2510a93eb94cabeabf0df6e87ba061432ff5410d6e21d53f1934456bc5c
  680. source_software: DeepLabCut
  681. type: poses
  682. fps: 247
  683. species: mouse
  684. number_of_individuals: 1
  685. shared_by:
  686. name: Holly Morley
  687. affiliation: Sainsbury Wellcome Centre, UCL
  688. frame:
  689. file_name: null
  690. sha256sum: null
  691. video:
  692. file_name: null
  693. sha256sum: null
  694. note: This file contains 3D pose predictions derived from triangulation of DeepLabCut
  695. predictions from three synchronised camera views ('side', 'front', and 'overhead')
  696. of a mouse locomoting on a dual-belt travelator apparatus. The 2D predictions
  697. from the 'side' camera view are available separately as DLC_single-mouse_DBTravelator_2D.predictions.h5.
  698. Likelihoods represent the median of the individual camera view prediction likelihoods.
  699. Coordinates where triangulation could not be performed (NaN values) were backfilled
  700. with zeros.