Channels: - defaults Platform: linux-64 Collecting package metadata (repodata.json): ...working... done Solving environment: ...working... done ## Package Plan ## environment location: /tmp/crabs-dev-42-5313275 added / updated specs: - python=3.10 The following NEW packages will be INSTALLED: _libgcc_mutex pkgs/main/linux-64::_libgcc_mutex-0.1-main _openmp_mutex pkgs/main/linux-64::_openmp_mutex-5.1-1_gnu bzip2 pkgs/main/linux-64::bzip2-1.0.8-h5eee18b_6 ca-certificates pkgs/main/linux-64::ca-certificates-2024.3.11-h06a4308_0 ld_impl_linux-64 pkgs/main/linux-64::ld_impl_linux-64-2.38-h1181459_1 libffi pkgs/main/linux-64::libffi-3.4.4-h6a678d5_1 libgcc-ng pkgs/main/linux-64::libgcc-ng-11.2.0-h1234567_1 libgomp pkgs/main/linux-64::libgomp-11.2.0-h1234567_1 libstdcxx-ng pkgs/main/linux-64::libstdcxx-ng-11.2.0-h1234567_1 libuuid pkgs/main/linux-64::libuuid-1.41.5-h5eee18b_0 ncurses pkgs/main/linux-64::ncurses-6.4-h6a678d5_0 openssl pkgs/main/linux-64::openssl-3.0.14-h5eee18b_0 pip pkgs/main/linux-64::pip-24.0-py310h06a4308_0 python pkgs/main/linux-64::python-3.10.14-h955ad1f_1 readline pkgs/main/linux-64::readline-8.2-h5eee18b_0 setuptools pkgs/main/linux-64::setuptools-69.5.1-py310h06a4308_0 sqlite pkgs/main/linux-64::sqlite-3.45.3-h5eee18b_0 tk pkgs/main/linux-64::tk-8.6.14-h39e8969_0 tzdata pkgs/main/noarch::tzdata-2024a-h04d1e81_0 wheel pkgs/main/linux-64::wheel-0.43.0-py310h06a4308_0 xz pkgs/main/linux-64::xz-5.4.6-h5eee18b_1 zlib pkgs/main/linux-64::zlib-1.2.13-h5eee18b_1 Downloading and Extracting Packages: ...working... done Preparing transaction: ...working... done Verifying transaction: ...working... done Executing transaction: ...working... done # # To activate this environment, use # # $ conda activate /tmp/crabs-dev-42-5313275 # # To deactivate an active environment, use # # $ conda deactivate Collecting git+https://github.com/SainsburyWellcomeCentre/crabs-exploration.git@main Cloning https://github.com/SainsburyWellcomeCentre/crabs-exploration.git (to revision main) to /tmp/pip-req-build-bazt9owa Resolved https://github.com/SainsburyWellcomeCentre/crabs-exploration.git to commit 73d539d5a79f750db24bb22f6e00ab5dee594100 Installing build dependencies: started Installing build dependencies: finished with status 'done' Getting requirements to build wheel: started Getting requirements to build wheel: finished with status 'done' Preparing metadata (pyproject.toml): started Preparing metadata (pyproject.toml): finished with status 'done' Collecting opencv-python (from crabs==0.1.dev401+g73d539d) Using cached opencv_python-4.10.0.84-cp37-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (20 kB) Collecting sleap==1.3.3 (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached sleap-1.3.3-py3-none-any.whl.metadata (17 kB) Collecting typer (from crabs==0.1.dev401+g73d539d) Using cached typer-0.12.3-py3-none-any.whl.metadata (15 kB) Collecting timecode (from crabs==0.1.dev401+g73d539d) Using cached timecode-1.4.0-py2.py3-none-any.whl Collecting torch (from crabs==0.1.dev401+g73d539d) Using cached torch-2.3.1-cp310-cp310-manylinux1_x86_64.whl.metadata (26 kB) Collecting torchvision (from crabs==0.1.dev401+g73d539d) Using cached torchvision-0.18.1-cp310-cp310-manylinux1_x86_64.whl.metadata (6.6 kB) Collecting pycocotools (from crabs==0.1.dev401+g73d539d) Using cached pycocotools-2.0.8-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.1 kB) Collecting filterpy (from crabs==0.1.dev401+g73d539d) Using cached filterpy-1.4.5-py3-none-any.whl Collecting lightning (from crabs==0.1.dev401+g73d539d) Using cached lightning-2.3.1-py3-none-any.whl.metadata (54 kB) Collecting mlflow (from crabs==0.1.dev401+g73d539d) Using cached mlflow-2.14.1-py3-none-any.whl.metadata (29 kB) Collecting optuna (from crabs==0.1.dev401+g73d539d) Using cached optuna-3.6.1-py3-none-any.whl.metadata (17 kB) Collecting imgstore<0.3.0 (from sleap==1.3.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached imgstore-0.2.9-py2.py3-none-any.whl.metadata (7.2 kB) Collecting ndx-pose (from sleap==1.3.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached ndx_pose-0.1.1-py2.py3-none-any.whl.metadata (3.7 kB) Collecting nixio>=1.5.3 (from sleap==1.3.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached nixio-1.5.3-py3-none-any.whl.metadata (2.3 kB) Collecting qimage2ndarray (from sleap==1.3.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached qimage2ndarray-1.10.0-py3-none-any.whl.metadata (2.3 kB) Collecting segmentation-models (from sleap==1.3.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached segmentation_models-1.0.1-py3-none-any.whl.metadata (938 bytes) Collecting pynwb>=2.3.3 (from sleap==1.3.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached pynwb-2.8.0-py3-none-any.whl.metadata (8.8 kB) Collecting attrs<=21.4.0,>=21.2.0 (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached attrs-21.4.0-py2.py3-none-any.whl.metadata (9.8 kB) Collecting cattrs==1.1.1 (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached cattrs-1.1.1-py3-none-any.whl.metadata (12 kB) Collecting jsmin (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached jsmin-3.0.1-py3-none-any.whl Collecting jsonpickle==1.2 (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached jsonpickle-1.2-py2.py3-none-any.whl.metadata (1.1 kB) Collecting networkx (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached networkx-3.3-py3-none-any.whl.metadata (5.1 kB) Collecting numpy<1.23.0,>=1.19.5 (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached numpy-1.22.4-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.0 kB) Collecting opencv-python (from crabs==0.1.dev401+g73d539d) Using cached opencv_python-4.5.5.64-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (18 kB) Collecting pandas (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached pandas-2.2.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (19 kB) Collecting pillow<=8.4.0,>=8.3.1 (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached Pillow-8.4.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (7.5 kB) Collecting psutil (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached psutil-6.0.0-cp36-abi3-manylinux_2_12_x86_64.manylinux2010_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (21 kB) Collecting pykalman==0.9.5 (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached pykalman-0.9.5-py3-none-any.whl Collecting pyyaml (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached PyYAML-6.0.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting pyzmq (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached pyzmq-26.0.3-cp310-cp310-manylinux_2_28_x86_64.whl.metadata (6.1 kB) Collecting qtpy>=2.0.1 (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached QtPy-2.4.1-py3-none-any.whl.metadata (12 kB) Collecting rich==10.16.1 (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached rich-10.16.1-py3-none-any.whl.metadata (19 kB) Collecting imgaug==0.4.0 (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached imgaug-0.4.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting scipy<=1.9.0,>=1.4.1 (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached scipy-1.9.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.2 kB) Collecting scikit-image (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached scikit_image-0.24.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (14 kB) Collecting scikit-learn==1.0.* (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached scikit_learn-1.0.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (10 kB) Collecting scikit-video (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached scikit_video-1.1.11-py2.py3-none-any.whl.metadata (1.1 kB) Collecting seaborn (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached seaborn-0.13.2-py3-none-any.whl.metadata (5.4 kB) Collecting tensorflow-hub<=0.14.0 (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached tensorflow_hub-0.14.0-py2.py3-none-any.whl.metadata (1.4 kB) Collecting urllib3<2.0 (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached urllib3-1.26.19-py2.py3-none-any.whl.metadata (49 kB) Collecting protobuf<3.20 (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached protobuf-3.19.6-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (787 bytes) Collecting PySide2<=5.14.1,>=5.13.2 (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached PySide2-5.13.2-5.13.2-cp35.cp36.cp37-abi3-manylinux1_x86_64.whl.metadata (4.8 kB) Collecting tensorflow<2.9,>=2.6.3 (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached tensorflow-2.8.4-cp310-cp310-manylinux2010_x86_64.whl.metadata (2.9 kB) Collecting python-rapidjson (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached python_rapidjson-1.17-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (21 kB) Collecting six (from imgaug==0.4.0->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting matplotlib (from imgaug==0.4.0->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached matplotlib-3.9.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (11 kB) Collecting imageio (from imgaug==0.4.0->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached imageio-2.34.2-py3-none-any.whl.metadata (4.9 kB) Collecting Shapely (from imgaug==0.4.0->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached shapely-2.0.4-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (7.0 kB) Collecting colorama<0.5.0,>=0.4.0 (from rich==10.16.1->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached colorama-0.4.6-py2.py3-none-any.whl.metadata (17 kB) Collecting commonmark<0.10.0,>=0.9.0 (from rich==10.16.1->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached commonmark-0.9.1-py2.py3-none-any.whl.metadata (5.7 kB) Collecting pygments<3.0.0,>=2.6.0 (from rich==10.16.1->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached pygments-2.18.0-py3-none-any.whl.metadata (2.5 kB) Collecting joblib>=0.11 (from scikit-learn==1.0.*->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached joblib-1.4.2-py3-none-any.whl.metadata (5.4 kB) Collecting threadpoolctl>=2.0.0 (from scikit-learn==1.0.*->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached threadpoolctl-3.5.0-py3-none-any.whl.metadata (13 kB) Collecting fsspec<2026.0,>=2022.5.0 (from fsspec[http]<2026.0,>=2022.5.0->lightning->crabs==0.1.dev401+g73d539d) Using cached fsspec-2024.6.1-py3-none-any.whl.metadata (11 kB) Collecting lightning-utilities<2.0,>=0.10.0 (from lightning->crabs==0.1.dev401+g73d539d) Using cached lightning_utilities-0.11.3.post0-py3-none-any.whl.metadata (4.7 kB) Collecting packaging<25.0,>=20.0 (from lightning->crabs==0.1.dev401+g73d539d) Using cached packaging-24.1-py3-none-any.whl.metadata (3.2 kB) Collecting torchmetrics<3.0,>=0.7.0 (from lightning->crabs==0.1.dev401+g73d539d) Using cached torchmetrics-1.4.0.post0-py3-none-any.whl.metadata (19 kB) Collecting tqdm<6.0,>=4.57.0 (from lightning->crabs==0.1.dev401+g73d539d) Using cached tqdm-4.66.4-py3-none-any.whl.metadata (57 kB) Collecting typing-extensions<6.0,>=4.4.0 (from lightning->crabs==0.1.dev401+g73d539d) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting pytorch-lightning (from lightning->crabs==0.1.dev401+g73d539d) Using cached pytorch_lightning-2.3.1-py3-none-any.whl.metadata (21 kB) Collecting filelock (from torch->crabs==0.1.dev401+g73d539d) Using cached filelock-3.15.4-py3-none-any.whl.metadata (2.9 kB) Collecting sympy (from torch->crabs==0.1.dev401+g73d539d) Using cached sympy-1.12.1-py3-none-any.whl.metadata (12 kB) Collecting jinja2 (from torch->crabs==0.1.dev401+g73d539d) Using cached jinja2-3.1.4-py3-none-any.whl.metadata (2.6 kB) Collecting nvidia-cuda-nvrtc-cu12==12.1.105 (from torch->crabs==0.1.dev401+g73d539d) Using cached nvidia_cuda_nvrtc_cu12-12.1.105-py3-none-manylinux1_x86_64.whl.metadata (1.5 kB) Collecting nvidia-cuda-runtime-cu12==12.1.105 (from torch->crabs==0.1.dev401+g73d539d) Using cached nvidia_cuda_runtime_cu12-12.1.105-py3-none-manylinux1_x86_64.whl.metadata (1.5 kB) Collecting nvidia-cuda-cupti-cu12==12.1.105 (from torch->crabs==0.1.dev401+g73d539d) Using cached nvidia_cuda_cupti_cu12-12.1.105-py3-none-manylinux1_x86_64.whl.metadata (1.6 kB) Collecting nvidia-cudnn-cu12==8.9.2.26 (from torch->crabs==0.1.dev401+g73d539d) Using cached nvidia_cudnn_cu12-8.9.2.26-py3-none-manylinux1_x86_64.whl.metadata (1.6 kB) Collecting nvidia-cublas-cu12==12.1.3.1 (from torch->crabs==0.1.dev401+g73d539d) Using cached nvidia_cublas_cu12-12.1.3.1-py3-none-manylinux1_x86_64.whl.metadata (1.5 kB) Collecting nvidia-cufft-cu12==11.0.2.54 (from torch->crabs==0.1.dev401+g73d539d) Using cached nvidia_cufft_cu12-11.0.2.54-py3-none-manylinux1_x86_64.whl.metadata (1.5 kB) Collecting nvidia-curand-cu12==10.3.2.106 (from torch->crabs==0.1.dev401+g73d539d) Using cached nvidia_curand_cu12-10.3.2.106-py3-none-manylinux1_x86_64.whl.metadata (1.5 kB) Collecting nvidia-cusolver-cu12==11.4.5.107 (from torch->crabs==0.1.dev401+g73d539d) Using cached nvidia_cusolver_cu12-11.4.5.107-py3-none-manylinux1_x86_64.whl.metadata (1.6 kB) Collecting nvidia-cusparse-cu12==12.1.0.106 (from torch->crabs==0.1.dev401+g73d539d) Using cached nvidia_cusparse_cu12-12.1.0.106-py3-none-manylinux1_x86_64.whl.metadata (1.6 kB) Collecting nvidia-nccl-cu12==2.20.5 (from torch->crabs==0.1.dev401+g73d539d) Using cached nvidia_nccl_cu12-2.20.5-py3-none-manylinux2014_x86_64.whl.metadata (1.8 kB) Collecting nvidia-nvtx-cu12==12.1.105 (from torch->crabs==0.1.dev401+g73d539d) Using cached nvidia_nvtx_cu12-12.1.105-py3-none-manylinux1_x86_64.whl.metadata (1.7 kB) Collecting triton==2.3.1 (from torch->crabs==0.1.dev401+g73d539d) Using cached triton-2.3.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.4 kB) Collecting nvidia-nvjitlink-cu12 (from nvidia-cusolver-cu12==11.4.5.107->torch->crabs==0.1.dev401+g73d539d) Using cached nvidia_nvjitlink_cu12-12.5.40-py3-none-manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting Flask<4 (from mlflow->crabs==0.1.dev401+g73d539d) Using cached flask-3.0.3-py3-none-any.whl.metadata (3.2 kB) Collecting alembic!=1.10.0,<2 (from mlflow->crabs==0.1.dev401+g73d539d) Using cached alembic-1.13.2-py3-none-any.whl.metadata (7.4 kB) Collecting cachetools<6,>=5.0.0 (from mlflow->crabs==0.1.dev401+g73d539d) Using cached cachetools-5.3.3-py3-none-any.whl.metadata (5.3 kB) Collecting click<9,>=7.0 (from mlflow->crabs==0.1.dev401+g73d539d) Using cached click-8.1.7-py3-none-any.whl.metadata (3.0 kB) Collecting cloudpickle<4 (from mlflow->crabs==0.1.dev401+g73d539d) Using cached cloudpickle-3.0.0-py3-none-any.whl.metadata (7.0 kB) Collecting docker<8,>=4.0.0 (from mlflow->crabs==0.1.dev401+g73d539d) Using cached docker-7.1.0-py3-none-any.whl.metadata (3.8 kB) Collecting entrypoints<1 (from mlflow->crabs==0.1.dev401+g73d539d) Using cached entrypoints-0.4-py3-none-any.whl.metadata (2.6 kB) Collecting gitpython<4,>=3.1.9 (from mlflow->crabs==0.1.dev401+g73d539d) Using cached GitPython-3.1.43-py3-none-any.whl.metadata (13 kB) Collecting graphene<4 (from mlflow->crabs==0.1.dev401+g73d539d) Using cached graphene-3.3-py2.py3-none-any.whl.metadata (7.7 kB) Collecting importlib-metadata!=4.7.0,<8,>=3.7.0 (from mlflow->crabs==0.1.dev401+g73d539d) Using cached importlib_metadata-7.2.1-py3-none-any.whl.metadata (4.6 kB) Collecting markdown<4,>=3.3 (from mlflow->crabs==0.1.dev401+g73d539d) Using cached Markdown-3.6-py3-none-any.whl.metadata (7.0 kB) Collecting opentelemetry-api<3,>=1.9.0 (from mlflow->crabs==0.1.dev401+g73d539d) Using cached opentelemetry_api-1.25.0-py3-none-any.whl.metadata (1.4 kB) Collecting opentelemetry-sdk<3,>=1.9.0 (from mlflow->crabs==0.1.dev401+g73d539d) Using cached opentelemetry_sdk-1.25.0-py3-none-any.whl.metadata (1.4 kB) Collecting pyarrow<16,>=4.0.0 (from mlflow->crabs==0.1.dev401+g73d539d) Using cached pyarrow-15.0.2-cp310-cp310-manylinux_2_28_x86_64.whl.metadata (3.0 kB) Collecting pytz<2025 (from mlflow->crabs==0.1.dev401+g73d539d) Using cached pytz-2024.1-py2.py3-none-any.whl.metadata (22 kB) Collecting querystring-parser<2 (from mlflow->crabs==0.1.dev401+g73d539d) Using cached querystring_parser-1.2.4-py2.py3-none-any.whl.metadata (559 bytes) Collecting requests<3,>=2.17.3 (from mlflow->crabs==0.1.dev401+g73d539d) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting sqlalchemy<3,>=1.4.0 (from mlflow->crabs==0.1.dev401+g73d539d) Using cached SQLAlchemy-2.0.31-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (9.6 kB) Collecting sqlparse<1,>=0.4.0 (from mlflow->crabs==0.1.dev401+g73d539d) Using cached sqlparse-0.5.0-py3-none-any.whl.metadata (3.9 kB) Collecting gunicorn<23 (from mlflow->crabs==0.1.dev401+g73d539d) Using cached gunicorn-22.0.0-py3-none-any.whl.metadata (4.4 kB) Collecting colorlog (from optuna->crabs==0.1.dev401+g73d539d) Using cached colorlog-6.8.2-py3-none-any.whl.metadata (10 kB) Collecting shellingham>=1.3.0 (from typer->crabs==0.1.dev401+g73d539d) Using cached shellingham-1.5.4-py2.py3-none-any.whl.metadata (3.5 kB) Collecting Mako (from alembic!=1.10.0,<2->mlflow->crabs==0.1.dev401+g73d539d) Using cached Mako-1.3.5-py3-none-any.whl.metadata (2.9 kB) Collecting Werkzeug>=3.0.0 (from Flask<4->mlflow->crabs==0.1.dev401+g73d539d) Using cached werkzeug-3.0.3-py3-none-any.whl.metadata (3.7 kB) Collecting itsdangerous>=2.1.2 (from Flask<4->mlflow->crabs==0.1.dev401+g73d539d) Using cached itsdangerous-2.2.0-py3-none-any.whl.metadata (1.9 kB) Collecting blinker>=1.6.2 (from Flask<4->mlflow->crabs==0.1.dev401+g73d539d) Using cached blinker-1.8.2-py3-none-any.whl.metadata (1.6 kB) Collecting aiohttp!=4.0.0a0,!=4.0.0a1 (from fsspec[http]<2026.0,>=2022.5.0->lightning->crabs==0.1.dev401+g73d539d) Using cached aiohttp-3.9.5-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (7.5 kB) Collecting gitdb<5,>=4.0.1 (from gitpython<4,>=3.1.9->mlflow->crabs==0.1.dev401+g73d539d) Using cached gitdb-4.0.11-py3-none-any.whl.metadata (1.2 kB) Collecting graphql-core<3.3,>=3.1 (from graphene<4->mlflow->crabs==0.1.dev401+g73d539d) Using cached graphql_core-3.2.3-py3-none-any.whl.metadata (10 kB) Collecting graphql-relay<3.3,>=3.1 (from graphene<4->mlflow->crabs==0.1.dev401+g73d539d) Using cached graphql_relay-3.2.0-py3-none-any.whl.metadata (12 kB) Collecting aniso8601<10,>=8 (from graphene<4->mlflow->crabs==0.1.dev401+g73d539d) Using cached aniso8601-9.0.1-py2.py3-none-any.whl.metadata (23 kB) Collecting python-dateutil (from imgstore<0.3.0->sleap==1.3.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl.metadata (8.4 kB) Collecting tzlocal (from imgstore<0.3.0->sleap==1.3.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached tzlocal-5.2-py3-none-any.whl.metadata (7.8 kB) Collecting zipp>=0.5 (from importlib-metadata!=4.7.0,<8,>=3.7.0->mlflow->crabs==0.1.dev401+g73d539d) Using cached zipp-3.19.2-py3-none-any.whl.metadata (3.6 kB) Collecting MarkupSafe>=2.0 (from jinja2->torch->crabs==0.1.dev401+g73d539d) Using cached MarkupSafe-2.1.5-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.0 kB) Requirement already satisfied: setuptools in /tmp/crabs-dev-42-5313275/lib/python3.10/site-packages (from lightning-utilities<2.0,>=0.10.0->lightning->crabs==0.1.dev401+g73d539d) (69.5.1) Collecting contourpy>=1.0.1 (from matplotlib->imgaug==0.4.0->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached contourpy-1.2.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (5.8 kB) Collecting cycler>=0.10 (from matplotlib->imgaug==0.4.0->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached cycler-0.12.1-py3-none-any.whl.metadata (3.8 kB) Collecting fonttools>=4.22.0 (from matplotlib->imgaug==0.4.0->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached fonttools-4.53.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (162 kB) Collecting kiwisolver>=1.3.1 (from matplotlib->imgaug==0.4.0->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached kiwisolver-1.4.5-cp310-cp310-manylinux_2_12_x86_64.manylinux2010_x86_64.whl.metadata (6.4 kB) INFO: pip is looking at multiple versions of matplotlib to determine which version is compatible with other requirements. This could take a while. Collecting matplotlib (from imgaug==0.4.0->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached matplotlib-3.8.4-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (5.8 kB) Collecting pyparsing>=2.3.1 (from matplotlib->imgaug==0.4.0->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached pyparsing-3.1.2-py3-none-any.whl.metadata (5.1 kB) Collecting h5py (from nixio>=1.5.3->sleap==1.3.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached h5py-3.11.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.5 kB) Collecting deprecated>=1.2.6 (from opentelemetry-api<3,>=1.9.0->mlflow->crabs==0.1.dev401+g73d539d) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting importlib-metadata!=4.7.0,<8,>=3.7.0 (from mlflow->crabs==0.1.dev401+g73d539d) Using cached importlib_metadata-7.1.0-py3-none-any.whl.metadata (4.7 kB) Collecting opentelemetry-semantic-conventions==0.46b0 (from opentelemetry-sdk<3,>=1.9.0->mlflow->crabs==0.1.dev401+g73d539d) Using cached opentelemetry_semantic_conventions-0.46b0-py3-none-any.whl.metadata (2.3 kB) Collecting tzdata>=2022.7 (from pandas->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached tzdata-2024.1-py2.py3-none-any.whl.metadata (1.4 kB) Collecting hdmf>=3.14.0 (from pynwb>=2.3.3->sleap==1.3.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached hdmf-3.14.1-py3-none-any.whl.metadata (8.8 kB) Collecting shiboken2==5.13.2 (from PySide2<=5.14.1,>=5.13.2->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached shiboken2-5.13.2-5.13.2-cp35.cp36.cp37-abi3-manylinux1_x86_64.whl.metadata (2.4 kB) Collecting charset-normalizer<4,>=2 (from requests<3,>=2.17.3->mlflow->crabs==0.1.dev401+g73d539d) Using cached charset_normalizer-3.3.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB) Collecting idna<4,>=2.5 (from requests<3,>=2.17.3->mlflow->crabs==0.1.dev401+g73d539d) Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB) Collecting certifi>=2017.4.17 (from requests<3,>=2.17.3->mlflow->crabs==0.1.dev401+g73d539d) Using cached certifi-2024.6.2-py3-none-any.whl.metadata (2.2 kB) INFO: pip is looking at multiple versions of scikit-image to determine which version is compatible with other requirements. This could take a while. Collecting scikit-image (from sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached scikit_image-0.23.2-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (14 kB) Using cached scikit_image-0.23.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (14 kB) Using cached scikit_image-0.22.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (13 kB) Using cached scikit_image-0.21.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (14 kB) Using cached scikit_image-0.20.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (16 kB) Using cached scikit_image-0.19.3-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (8.0 kB) Collecting tifffile>=2019.7.26 (from scikit-image->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached tifffile-2024.6.18-py3-none-any.whl.metadata (31 kB) Collecting PyWavelets>=1.1.1 (from scikit-image->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using 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(from tensorflow<2.9,>=2.6.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached google_pasta-0.2.0-py3-none-any.whl.metadata (814 bytes) Collecting keras-preprocessing>=1.1.1 (from tensorflow<2.9,>=2.6.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached Keras_Preprocessing-1.1.2-py2.py3-none-any.whl.metadata (1.9 kB) Collecting libclang>=9.0.1 (from tensorflow<2.9,>=2.6.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached libclang-18.1.1-py2.py3-none-manylinux2010_x86_64.whl.metadata (5.2 kB) Collecting opt-einsum>=2.3.2 (from tensorflow<2.9,>=2.6.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached opt_einsum-3.3.0-py3-none-any.whl.metadata (6.5 kB) Collecting termcolor>=1.1.0 (from tensorflow<2.9,>=2.6.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached termcolor-2.4.0-py3-none-any.whl.metadata (6.1 kB) Collecting wrapt>=1.11.0 (from tensorflow<2.9,>=2.6.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached wrapt-1.16.0-cp310-cp310-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting tensorboard<2.9,>=2.8 (from tensorflow<2.9,>=2.6.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached tensorboard-2.8.0-py3-none-any.whl.metadata (1.9 kB) Collecting tensorflow-estimator<2.9,>=2.8 (from tensorflow<2.9,>=2.6.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached tensorflow_estimator-2.8.0-py2.py3-none-any.whl.metadata (1.3 kB) Collecting keras<2.9,>=2.8.0rc0 (from tensorflow<2.9,>=2.6.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached keras-2.8.0-py2.py3-none-any.whl.metadata (1.3 kB) Collecting tensorflow-io-gcs-filesystem>=0.23.1 (from tensorflow<2.9,>=2.6.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached tensorflow_io_gcs_filesystem-0.37.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (14 kB) Collecting grpcio<2.0,>=1.24.3 (from tensorflow<2.9,>=2.6.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached grpcio-1.64.1-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.3 kB) Collecting keras-applications<=1.0.8,>=1.0.7 (from segmentation-models->sleap==1.3.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached Keras_Applications-1.0.8-py3-none-any.whl.metadata (1.7 kB) Collecting image-classifiers==1.0.0 (from segmentation-models->sleap==1.3.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached image_classifiers-1.0.0-py3-none-any.whl.metadata (8.6 kB) Collecting efficientnet==1.0.0 (from segmentation-models->sleap==1.3.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached efficientnet-1.0.0-py3-none-any.whl.metadata (6.1 kB) Collecting mpmath<1.4.0,>=1.1.0 (from sympy->torch->crabs==0.1.dev401+g73d539d) Using cached mpmath-1.3.0-py3-none-any.whl.metadata (8.6 kB) Collecting aiosignal>=1.1.2 (from aiohttp!=4.0.0a0,!=4.0.0a1->fsspec[http]<2026.0,>=2022.5.0->lightning->crabs==0.1.dev401+g73d539d) Using cached aiosignal-1.3.1-py3-none-any.whl.metadata (4.0 kB) Collecting frozenlist>=1.1.1 (from aiohttp!=4.0.0a0,!=4.0.0a1->fsspec[http]<2026.0,>=2022.5.0->lightning->crabs==0.1.dev401+g73d539d) Using cached frozenlist-1.4.1-cp310-cp310-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (12 kB) Collecting multidict<7.0,>=4.5 (from aiohttp!=4.0.0a0,!=4.0.0a1->fsspec[http]<2026.0,>=2022.5.0->lightning->crabs==0.1.dev401+g73d539d) Using cached multidict-6.0.5-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (4.2 kB) Collecting yarl<2.0,>=1.0 (from aiohttp!=4.0.0a0,!=4.0.0a1->fsspec[http]<2026.0,>=2022.5.0->lightning->crabs==0.1.dev401+g73d539d) Using cached yarl-1.9.4-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (31 kB) Collecting async-timeout<5.0,>=4.0 (from aiohttp!=4.0.0a0,!=4.0.0a1->fsspec[http]<2026.0,>=2022.5.0->lightning->crabs==0.1.dev401+g73d539d) Using cached async_timeout-4.0.3-py3-none-any.whl.metadata (4.2 kB) Requirement already satisfied: wheel<1.0,>=0.23.0 in /tmp/crabs-dev-42-5313275/lib/python3.10/site-packages (from astunparse>=1.6.0->tensorflow<2.9,>=2.6.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) (0.43.0) Collecting smmap<6,>=3.0.1 (from gitdb<5,>=4.0.1->gitpython<4,>=3.1.9->mlflow->crabs==0.1.dev401+g73d539d) Using cached smmap-5.0.1-py3-none-any.whl.metadata (4.3 kB) Collecting jsonschema>=2.6.0 (from hdmf>=3.14.0->pynwb>=2.3.3->sleap==1.3.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached jsonschema-4.22.0-py3-none-any.whl.metadata (8.2 kB) Collecting ruamel-yaml>=0.16 (from hdmf>=3.14.0->pynwb>=2.3.3->sleap==1.3.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting google-auth<3,>=1.6.3 (from tensorboard<2.9,>=2.8->tensorflow<2.9,>=2.6.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached google_auth-2.30.0-py2.py3-none-any.whl.metadata (4.7 kB) Collecting google-auth-oauthlib<0.5,>=0.4.1 (from tensorboard<2.9,>=2.8->tensorflow<2.9,>=2.6.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached google_auth_oauthlib-0.4.6-py2.py3-none-any.whl.metadata (2.7 kB) Collecting tensorboard-data-server<0.7.0,>=0.6.0 (from tensorboard<2.9,>=2.8->tensorflow<2.9,>=2.6.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached tensorboard_data_server-0.6.1-py3-none-manylinux2010_x86_64.whl.metadata (1.1 kB) Collecting tensorboard-plugin-wit>=1.6.0 (from tensorboard<2.9,>=2.8->tensorflow<2.9,>=2.6.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached tensorboard_plugin_wit-1.8.1-py3-none-any.whl.metadata (873 bytes) Collecting pyasn1-modules>=0.2.1 (from google-auth<3,>=1.6.3->tensorboard<2.9,>=2.8->tensorflow<2.9,>=2.6.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached pyasn1_modules-0.4.0-py3-none-any.whl.metadata (3.4 kB) Collecting rsa<5,>=3.1.4 (from google-auth<3,>=1.6.3->tensorboard<2.9,>=2.8->tensorflow<2.9,>=2.6.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached rsa-4.9-py3-none-any.whl.metadata (4.2 kB) Collecting requests-oauthlib>=0.7.0 (from google-auth-oauthlib<0.5,>=0.4.1->tensorboard<2.9,>=2.8->tensorflow<2.9,>=2.6.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached requests_oauthlib-2.0.0-py2.py3-none-any.whl.metadata (11 kB) INFO: pip is looking at multiple versions of jsonschema to determine which version is compatible with other requirements. This could take a while. Collecting jsonschema>=2.6.0 (from hdmf>=3.14.0->pynwb>=2.3.3->sleap==1.3.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached jsonschema-4.21.1-py3-none-any.whl.metadata (7.8 kB) Using cached jsonschema-4.21.0-py3-none-any.whl.metadata (8.0 kB) Using cached jsonschema-4.20.0-py3-none-any.whl.metadata (8.1 kB) Using cached jsonschema-4.19.2-py3-none-any.whl.metadata (7.9 kB) Using cached jsonschema-4.19.1-py3-none-any.whl.metadata (7.9 kB) Using cached jsonschema-4.19.0-py3-none-any.whl.metadata (8.2 kB) Using cached jsonschema-4.18.6-py3-none-any.whl.metadata (7.8 kB) INFO: pip is still looking at multiple versions of jsonschema to determine which version is compatible with other requirements. This could take a while. Using cached jsonschema-4.18.5-py3-none-any.whl.metadata (7.7 kB) Using cached jsonschema-4.18.4-py3-none-any.whl.metadata (7.8 kB) Using cached jsonschema-4.18.3-py3-none-any.whl.metadata (7.9 kB) Using cached jsonschema-4.18.2-py3-none-any.whl.metadata (7.8 kB) Using cached jsonschema-4.18.1-py3-none-any.whl.metadata (7.8 kB) INFO: This is taking longer than usual. You might need to provide the dependency resolver with stricter constraints to reduce runtime. See https://pip.pypa.io/warnings/backtracking for guidance. If you want to abort this run, press Ctrl + C. Using cached jsonschema-4.18.0-py3-none-any.whl.metadata (10 kB) Using cached jsonschema-4.17.3-py3-none-any.whl.metadata (7.9 kB) Collecting pyrsistent!=0.17.0,!=0.17.1,!=0.17.2,>=0.14.0 (from jsonschema>=2.6.0->hdmf>=3.14.0->pynwb>=2.3.3->sleap==1.3.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached pyrsistent-0.20.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (27 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel-yaml>=0.16->hdmf>=3.14.0->pynwb>=2.3.3->sleap==1.3.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached ruamel.yaml.clib-0.2.8-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (2.2 kB) Collecting pyasn1<0.7.0,>=0.4.6 (from pyasn1-modules>=0.2.1->google-auth<3,>=1.6.3->tensorboard<2.9,>=2.8->tensorflow<2.9,>=2.6.3->sleap[pypi]==1.3.3->crabs==0.1.dev401+g73d539d) Using cached pyasn1-0.6.0-py2.py3-none-any.whl.metadata (8.3 kB) Collecting oauthlib>=3.0.0 (from 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shapely-2.0.4-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (2.5 MB) Using cached tzlocal-5.2-py3-none-any.whl (17 kB) Using cached aiosignal-1.3.1-py3-none-any.whl (7.6 kB) Using cached async_timeout-4.0.3-py3-none-any.whl (5.7 kB) Using cached frozenlist-1.4.1-cp310-cp310-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (239 kB) Using cached google_auth-2.30.0-py2.py3-none-any.whl (193 kB) Using cached google_auth_oauthlib-0.4.6-py2.py3-none-any.whl (18 kB) Using cached jsonschema-4.17.3-py3-none-any.whl (90 kB) Using cached multidict-6.0.5-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (124 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached smmap-5.0.1-py3-none-any.whl (24 kB) Using cached tensorboard_data_server-0.6.1-py3-none-manylinux2010_x86_64.whl (4.9 MB) Using cached tensorboard_plugin_wit-1.8.1-py3-none-any.whl (781 kB) Using cached yarl-1.9.4-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (301 kB) Using cached pyasn1_modules-0.4.0-py3-none-any.whl (181 kB) Using cached pyrsistent-0.20.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (117 kB) Using cached requests_oauthlib-2.0.0-py2.py3-none-any.whl (24 kB) Using cached rsa-4.9-py3-none-any.whl (34 kB) Using cached ruamel.yaml.clib-0.2.8-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (526 kB) Using cached oauthlib-3.2.2-py3-none-any.whl (151 kB) Using cached pyasn1-0.6.0-py2.py3-none-any.whl (85 kB) Building wheels for collected packages: crabs Building wheel for crabs (pyproject.toml): started Building wheel for crabs (pyproject.toml): finished with status 'done' Created wheel for crabs: filename=crabs-0.1.dev401+g73d539d-py3-none-any.whl size=58300 sha256=c1ac64b9a525077b62de6f7d974682c6745060cb267781e2475fea7138739c68 Stored in directory: /tmp/pip-ephem-wheel-cache-zil516eq/wheels/c8/45/0b/078b38b543d95b0623f05b93cbc9daa748c0067e97d76cc8a3 Successfully built crabs Installing collected packages: timecode, tensorflow-estimator, tensorboard-plugin-wit, shiboken2, pytz, pykalman, mpmath, libclang, keras, jsonpickle, jsmin, flatbuffers, commonmark, aniso8601, zipp, wrapt, urllib3, tzlocal, tzdata, typing-extensions, tqdm, threadpoolctl, termcolor, tensorflow-io-gcs-filesystem, tensorboard-data-server, sympy, sqlparse, smmap, six, shellingham, ruamel.yaml.clib, pyzmq, pyyaml, python-rapidjson, PySide2, pyrsistent, pyparsing, pygments, pyasn1, psutil, protobuf, pillow, packaging, oauthlib, nvidia-nvtx-cu12, nvidia-nvjitlink-cu12, nvidia-nccl-cu12, nvidia-curand-cu12, nvidia-cufft-cu12, nvidia-cuda-runtime-cu12, nvidia-cuda-nvrtc-cu12, nvidia-cuda-cupti-cu12, nvidia-cublas-cu12, numpy, networkx, multidict, MarkupSafe, markdown, kiwisolver, joblib, itsdangerous, idna, grpcio, greenlet, graphql-core, gast, fsspec, frozenlist, fonttools, filelock, entrypoints, cycler, colorlog, colorama, cloudpickle, click, charset-normalizer, certifi, cachetools, blinker, attrs, async-timeout, absl-py, yarl, Werkzeug, triton, tifffile, tensorflow-hub, sqlalchemy, Shapely, scipy, ruamel-yaml, rsa, rich, requests, querystring-parser, qtpy, qimage2ndarray, PyWavelets, python-dateutil, pyasn1-modules, pyarrow, opt-einsum, opencv-python, nvidia-cusparse-cu12, nvidia-cudnn-cu12, Mako, lightning-utilities, keras-preprocessing, jsonschema, jinja2, importlib-metadata, imageio, h5py, gunicorn, graphql-relay, google-pasta, gitdb, deprecated, contourpy, cattrs, astunparse, aiosignal, typer, scikit-video, scikit-learn, scikit-image, requests-oauthlib, pandas, opentelemetry-api, nvidia-cusolver-cu12, nixio, matplotlib, keras-applications, graphene, google-auth, gitpython, Flask, docker, alembic, aiohttp, torch, seaborn, pycocotools, optuna, opentelemetry-semantic-conventions, imgstore, imgaug, image-classifiers, hdmf, google-auth-oauthlib, filterpy, efficientnet, torchvision, torchmetrics, tensorboard, segmentation-models, pynwb, opentelemetry-sdk, tensorflow, pytorch-lightning, ndx-pose, mlflow, sleap, lightning, crabs Successfully installed Flask-3.0.3 Mako-1.3.5 MarkupSafe-2.1.5 PySide2-5.13.2 PyWavelets-1.6.0 Shapely-2.0.4 Werkzeug-3.0.3 absl-py-2.1.0 aiohttp-3.9.5 aiosignal-1.3.1 alembic-1.13.2 aniso8601-9.0.1 astunparse-1.6.3 async-timeout-4.0.3 attrs-21.4.0 blinker-1.8.2 cachetools-5.3.3 cattrs-1.1.1 certifi-2024.6.2 charset-normalizer-3.3.2 click-8.1.7 cloudpickle-3.0.0 colorama-0.4.6 colorlog-6.8.2 commonmark-0.9.1 contourpy-1.2.1 crabs-0.1.dev401+g73d539d cycler-0.12.1 deprecated-1.2.14 docker-7.1.0 efficientnet-1.0.0 entrypoints-0.4 filelock-3.15.4 filterpy-1.4.5 flatbuffers-24.3.25 fonttools-4.53.0 frozenlist-1.4.1 fsspec-2024.6.1 gast-0.6.0 gitdb-4.0.11 gitpython-3.1.43 google-auth-2.30.0 google-auth-oauthlib-0.4.6 google-pasta-0.2.0 graphene-3.3 graphql-core-3.2.3 graphql-relay-3.2.0 greenlet-3.0.3 grpcio-1.64.1 gunicorn-22.0.0 h5py-3.11.0 hdmf-3.14.1 idna-3.7 image-classifiers-1.0.0 imageio-2.34.2 imgaug-0.4.0 imgstore-0.2.9 importlib-metadata-7.1.0 itsdangerous-2.2.0 jinja2-3.1.4 joblib-1.4.2 jsmin-3.0.1 jsonpickle-1.2 jsonschema-4.17.3 keras-2.8.0 keras-applications-1.0.8 keras-preprocessing-1.1.2 kiwisolver-1.4.5 libclang-18.1.1 lightning-2.3.1 lightning-utilities-0.11.3.post0 markdown-3.6 matplotlib-3.8.4 mlflow-2.14.1 mpmath-1.3.0 multidict-6.0.5 ndx-pose-0.1.1 networkx-3.3 nixio-1.5.3 numpy-1.22.4 nvidia-cublas-cu12-12.1.3.1 nvidia-cuda-cupti-cu12-12.1.105 nvidia-cuda-nvrtc-cu12-12.1.105 nvidia-cuda-runtime-cu12-12.1.105 nvidia-cudnn-cu12-8.9.2.26 nvidia-cufft-cu12-11.0.2.54 nvidia-curand-cu12-10.3.2.106 nvidia-cusolver-cu12-11.4.5.107 nvidia-cusparse-cu12-12.1.0.106 nvidia-nccl-cu12-2.20.5 nvidia-nvjitlink-cu12-12.5.40 nvidia-nvtx-cu12-12.1.105 oauthlib-3.2.2 opencv-python-4.5.5.64 opentelemetry-api-1.25.0 opentelemetry-sdk-1.25.0 opentelemetry-semantic-conventions-0.46b0 opt-einsum-3.3.0 optuna-3.6.1 packaging-24.1 pandas-2.2.2 pillow-8.4.0 protobuf-3.19.6 psutil-6.0.0 pyarrow-15.0.2 pyasn1-0.6.0 pyasn1-modules-0.4.0 pycocotools-2.0.8 pygments-2.18.0 pykalman-0.9.5 pynwb-2.8.0 pyparsing-3.1.2 pyrsistent-0.20.0 python-dateutil-2.9.0.post0 python-rapidjson-1.17 pytorch-lightning-2.3.1 pytz-2024.1 pyyaml-6.0.1 pyzmq-26.0.3 qimage2ndarray-1.10.0 qtpy-2.4.1 querystring-parser-1.2.4 requests-2.32.3 requests-oauthlib-2.0.0 rich-10.16.1 rsa-4.9 ruamel-yaml-0.18.6 ruamel.yaml.clib-0.2.8 scikit-image-0.19.3 scikit-learn-1.0.2 scikit-video-1.1.11 scipy-1.9.0 seaborn-0.13.2 segmentation-models-1.0.1 shellingham-1.5.4 shiboken2-5.13.2 six-1.16.0 sleap-1.3.3 smmap-5.0.1 sqlalchemy-2.0.31 sqlparse-0.5.0 sympy-1.12.1 tensorboard-2.8.0 tensorboard-data-server-0.6.1 tensorboard-plugin-wit-1.8.1 tensorflow-2.8.4 tensorflow-estimator-2.8.0 tensorflow-hub-0.14.0 tensorflow-io-gcs-filesystem-0.37.0 termcolor-2.4.0 threadpoolctl-3.5.0 tifffile-2024.6.18 timecode-1.4.0 torch-2.3.1 torchmetrics-1.4.0.post0 torchvision-0.18.1 tqdm-4.66.4 triton-2.3.1 typer-0.12.3 typing-extensions-4.12.2 tzdata-2024.1 tzlocal-5.2 urllib3-1.26.19 wrapt-1.16.0 yarl-1.9.4 zipp-3.19.2 /tmp/crabs-dev-42-5313275 /tmp/crabs-dev-42-5313275/bin/python /tmp/crabs-dev-42-5313275/bin/pip Git branch: main # packages in environment at /tmp/crabs-dev-42-5313275: # # Name Version Build Channel crabs 0.1.dev401+g73d539d pypi_0 pypi ----- Memory used per GPU before training name, memory.total [MiB], memory.free [MiB], memory.used [MiB] NVIDIA A100-SXM4-40GB, 40960 MiB, 30706 MiB, 9633 MiB ----- loading annotations into memory... Done (t=0.21s) creating index... index created! loading annotations into memory... Done (t=0.22s) creating index... index created! Sanity Checking: | | 0/? [00:00